Polynucleobacter antarcticus: DCO16_08910
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Entry
DCO16_08910 CDS
T08332
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pani
Polynucleobacter antarcticus
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pani03016
]
DCO16_08910
Enzymes [BR:
pani01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DCO16_08910
Transfer RNA biogenesis [BR:
pani03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DCO16_08910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
SesA
Motif
Other DBs
NCBI-ProteinID:
QKM63159
UniProt:
A0A6M9PR79
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All DBs
Position
1713238..1714719
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AA seq
493 aa
AA seq
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MAKKSYHHQKFTRADLAHIATIAMLERGLEPEFSAEVHNQLDLIAAPGQDQDPTITDLTG
LLWCSLDNDDSRDLDQLTASISLENGSTKIFVAIADVDAVIKKHSPIDEHAKLNTASVYT
SARIFPMLPEKLSTNLTSLNPDELRLALVTEMTISQDGTVEDSQIYRAKVINKAKLAYDA
ISAWIEGVGSAPTALCSVKGMEEQLHTQDRVAQTLRKRRHDAGSLHLELFQPKAIFKKDL
IVGIQEQVQNRGRQLIEEFMIAVNESTAHFLLKHRVPSLRRVVRSPDRWLRIVELARQYG
DVLPADPDSKALSEFLARRLKADPIRFPDLSLIVVKLMGPGEYVLERPGTDAIGHFGLAV
QDYTHSTAPNRRYPDLITLRMIKSILQKQALAYETKELQELAEHCTKQEDAIRKVERRVR
KSEAALFLEPYIGKTFDGIITGIAPNNGWVRIFNPPAEGMLMSRTQLVDIGRKVHVQLVS
TNVEMGFINFALV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaatcatatcatcatcagaaatttacccgtgcagacttggctcatatcgca
acaattgccatgctagagcgcggtcttgagcctgaattttcagcagaagtacacaatcag
ctcgatttaattgcagcgcctgggcaagatcaggatcccactattactgatctgacaggc
ttactatggtgctctttagataatgatgactctcgagatctcgatcaattaacagcatct
atctcactagaaaatggctctaccaaaatttttgtagcgattgccgatgtagatgcggta
attaaaaagcattctccgattgatgagcatgccaagctaaatacagcatcagtgtataca
tcggcacgaatcttccccatgcttcctgaaaagctctccactaatctcacctccttaaat
ccagatgagttacgtttagccttggtgaccgagatgactatttctcaggatgggacagta
gaggactctcaaatataccgagccaaggtaatcaacaaggccaagctagcctacgatgcc
atctctgcttggattgagggcgtaggttccgctccaaccgctctttgtagtgtgaagggc
atggaagagcaactccatactcaagatcgggttgcacagacactgcgcaagcgccgacat
gatgcgggatcccttcacttagagctcttccagcctaaggcgatttttaagaaagatctt
attgttggtattcaggagcaagtgcagaaccgcggtcgacaactgattgaagagttcatg
attgcagtcaatgagagcaccgcacatttcctacttaagcaccgcgtgccctctttgcga
agagtcgtacgtagtccagatcgatggttaagaattgtggagcttgctaggcagtatggc
gatgtcctacctgcggatcctgactctaaagccttatctgaatttttagcgaggcgctta
aaggccgatcctattcgttttccagatctgtctttaattgtggtgaagctcatgggccca
ggagagtatgtattagagcggcccggtaccgatgctatcggacactttggtctagcggtt
caagactatacccactctaccgcccctaatcgtcgctatcccgatctcattaccttacga
atgattaaaagcattcttcaaaagcaagctctagcttatgaaacgaaagagctacaagag
ttagcagagcactgcactaaacaagaggatgccattcggaaagttgagcgcagggtacgt
aaatcagaggcagcactctttctagagccttatattggcaagacctttgatggcattatt
actggcattgccccaaataatggctgggtacgtattttcaatcctcctgcagagggtatg
ctgatgagtcgaacgcagttagtggatatcggcagaaaagtacatgtgcaactggtatca
actaatgtagaaatgggctttattaactttgcattagtctag
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