Polynucleobacter antarcticus: DCO16_08960
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Entry
DCO16_08960 CDS
T08332
Name
(GenBank) ethanolamine utilization protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pani
Polynucleobacter antarcticus
Pathway
pani03030
DNA replication
pani03430
Mismatch repair
pani03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DCO16_08960
03430 Mismatch repair
DCO16_08960
03440 Homologous recombination
DCO16_08960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pani03032
]
DCO16_08960
03400 DNA repair and recombination proteins [BR:
pani03400
]
DCO16_08960
Enzymes [BR:
pani01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DCO16_08960
DNA replication proteins [BR:
pani03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DCO16_08960
DNA repair and recombination proteins [BR:
pani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DCO16_08960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
LEM-3_GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
QKM63167
UniProt:
A0A6M9PW45
LinkDB
All DBs
Position
1720924..1722330
Genome browser
AA seq
468 aa
AA seq
DB search
MTKSDAFPPLAFVDIETTGSHFERDRITEIGIITLHNNEITRWEKLINPHTFIPGNIQAL
TGIKPEMLVDAPSFSELSRELLQELEGKIFVAHNARFDYGFIKVAFKREGIDFKPKVLCT
VKLSRRLFPDQARHNLDTLATVHALKISQRHRALGDADLLLQFWNCCIDKLGAHTLYGSA
KDLLGHSTLPSHIDPDLVNLIPDRPGVYLFYGENKLPIYIGKSNSLRTRVLSHFQGALSK
SKEMKIAMQVRDIDWIETSGEIGALLLESTLIKDKLPTLNIKLRRSKDLCGWQLAPNHHG
AIVPELVTHRDLKPGRQDNLFGLFYSRREARLMLESIAQKNQLCQGLLGLEKLSASQPCF
GYQVKRCQGACIGEESLEMHNTRLKMAFIKFKVANWPFKGPIGIQEGKDVHVIDHWCYLG
TAINEDEVAELLDSGEPEFDLDIYKLLKKSLQVISPSRIFELSPRPAR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatccgacgcttttccaccgcttgcttttgtagatattgaaacaacaggatcc
cactttgagcgtgatcgtattactgaaatagggattattaccctacacaataatgaaata
acacgatgggaaaagttgattaatcctcacacttttattccaggcaatattcaagcttta
acaggtataaagccagagatgcttgtggatgcccccagcttttcagaactgagtagggag
ctattgcaggagctagagggtaagatttttgttgcacataatgcccgctttgattatggc
tttattaaagtagcattcaagcgagaaggcattgactttaagccaaaagtcttatgtaca
gtcaagctatcccgacgactttttccagatcaagcccgccataatttagatactttagct
actgtgcacgcactaaagattagtcagcgtcatcgcgctttaggagatgctgacttacta
ttacagttctggaactgctgtattgataagctaggcgcccatactttatatggttcagcc
aaagatctattggggcatagcacccttcccagtcatatagatcctgatttagtaaatctc
attcctgatagacctggggtctatttgttttacggtgaaaataagttacctatttatatc
ggcaaaagtaattcgctacgcacgagagtgctcagtcattttcaaggcgctctctccaag
agtaaggagatgaaaattgccatgcaagtacgcgatatcgattggattgaaacctctggt
gaaattggggcactcttgctcgaatctactttaattaaagataagcttcctaccctcaat
atcaaattacgacgctccaaagatttatgtggctggcaactagcccctaatcatcacggc
gctatagtcccagaattggtaacacatcgtgatttaaagcctggcaggcaagacaattta
tttggtcttttttatagtcgacgcgaagcacgattaatgcttgaatctattgctcagaag
aatcaactatgccaaggattacttggcctagaaaaactgagtgcttcacaaccttgtttt
ggctatcaagtaaaaagatgtcagggagcctgtattggagaagaatctctcgaaatgcac
aatacaagactcaagatggcatttataaagtttaaagtagcgaattggccatttaaaggg
cctataggcattcaggaaggtaaggatgttcatgtgattgatcactggtgttacttggga
actgccatcaatgaagatgaggtcgctgaattactcgattcaggtgagcctgagtttgat
ttagatatttacaagctactcaaaaaaagtttacaagtaataagcccgtctcggattttt
gagctctcccctcggccggctagataa
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