Polynucleobacter antarcticus: DCO16_09310
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Entry
DCO16_09310 CDS
T08332
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pani
Polynucleobacter antarcticus
Pathway
pani03030
DNA replication
pani03410
Base excision repair
pani03420
Nucleotide excision repair
pani03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DCO16_09310
03410 Base excision repair
DCO16_09310
03420 Nucleotide excision repair
DCO16_09310
03440 Homologous recombination
DCO16_09310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pani03032
]
DCO16_09310
03400 DNA repair and recombination proteins [BR:
pani03400
]
DCO16_09310
Enzymes [BR:
pani01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DCO16_09310
DNA replication proteins [BR:
pani03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DCO16_09310
DNA repair and recombination proteins [BR:
pani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DCO16_09310
NER (nucleotide excision repair)
GGR (global genome repair) factors
DCO16_09310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QKM63224
UniProt:
A0A6M9PLW0
LinkDB
All DBs
Position
complement(1792694..1795543)
Genome browser
AA seq
949 aa
AA seq
DB search
MTKHRLLLVDGSSYLYRAFHAMPDLRNGAGDPTGAIYGVVNMMRRARSDIQADHIACVFD
AKGKTFRDEMYPDYKAHRSPMPEDLVKQIEPIHAMVKALGWPVLMVSGVEADDVIGTLAC
QATQAGWETIISTGDKDLAQLVNPSVTLINTMTDEKLDIEGVIAKFGVPPERIVDYLSII
GDAVDNVPGVPKAGPKTANKWLAEFGDLDQLMANADQVKGVVGENLRNSLEWLPKARQLI
TVKTDCDLSPHLPGLDDLHAKPEDAPLLRELFERYAFKTWLRDVEKQLGRPAVSAETASE
EYSSGFDLAGSPLQPASVAGNNTTSKKWGAVATSPTTALSQATTDLQSAISKHYECVVDE
AALERWIKKIEGVALTAVDTETTGLDALAAELVGISLCVAPGDACYIPVAHRNGETQLGR
ELVLARLKPWLESTTNHKVGQHLKYDAHIFANYGITLQGIAFDTLLESYVLESHMPHNMD
SLADRHLGIKTIRYEEVCGKGVHQIGFDQVDLKIATDYAAEDADITLRLHLALWPQIQES
PGLLYVYEKIEMPAMRVLGIMERNGIRIDSALLSRQGQEVGKRLLSLEGEIHQLAGQPFN
IQSPKQIAEILFGQLELPVIKKTPSGAPSTDEEVLQKLAEDYPLPARILDYRSLAKLMST
YIEKLPRMADPKTGRVHTNFSQATAVTGRLASSEPNLQNIPVRTEEGRRIREAFIPAEGC
KLLSADYSQIELRIMAHIAEDENLLAAFAAGKDVHQATAAEIFGVPLDAVNSEQRRYAKV
INFGLIYGMSAFGLAGNLGIERSAAQSYITKYFDRYPGVAQYMERTRLEARENGYVETVF
GRRLWLPEIKGSNGPRRQGAERAAINAPMQGTAADLIKLAMVAVENWLEKEQLKTRMLLQ
VHDELVFDVPLDELALLQAKLPDLMCKVADLKVPLVVGIGIGDNWEEAH
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgactaaacatagactcttgttggtagacggctctagctacctctaccgcgcctttcat
gccatgccagacctccgaaatggggcgggcgacccaactggggcaatttacggggtggtc
aatatgatgcgccgggctagatcggatattcaggctgaccatatcgcttgtgtttttgat
gccaagggtaagaccttccgcgacgaaatgtaccctgactacaaagcccatcgctcgccc
atgccagaagatttagtgaagcagattgaacccattcatgcgatggtcaaagctctgggt
tggcctgtgttgatggtgtccggtgtcgaagcagatgatgtgattggcaccttagcttgc
caagcaacccaggcaggatgggaaaccattatttctactggcgataaagatctcgcgcaa
ttagtcaatccttccgttaccttaatcaatacgatgactgatgaaaagctcgacatcgaa
ggcgtgattgcgaagtttggtgtgccaccagagcgaatcgtagattacctatcaattatt
ggtgatgccgtggataacgttcctggtgtcccgaaggctggaccaaaaacagccaacaaa
tggttagcagaattcggcgacttagatcaattgatggctaatgccgatcaagtgaagggt
gttgttggcgagaacttgcgcaatagtttggagtggctacccaaagcccgccaactcatt
acggttaaaaccgattgtgatttatcgccacacttaccaggcttagacgatctgcatgcc
aagcctgaagatgcaccgctattgcgagagttatttgaacgttatgcatttaagacttgg
ttgcgagatgtagaaaagcaattgggaagacctgctgtatctgctgaaactgctagtgag
gaatatagcagtggttttgatttggcggggagtccacttcaacctgcaagcgttgcaggt
aacaatacaactagtaaaaaatggggtgcagtagccacatcaccaaccactgctttatct
caagcaacgactgatttacaaagcgcgatttcaaaacactatgagtgtgttgttgatgaa
gctgccttggagcgttggatcaaaaagatcgagggcgtagcactgactgcagtagatact
gaaacgacaggtttagatgcacttgctgcagagctggtaggtatctcgctatgtgttgcg
cctggcgatgcttgttacattcctgtagcacatcgcaatggagagacgcagctgggtcgt
gagctagttttagcccgcctgaagccttggttagaaagcaccacgaaccataaagtaggg
cagcacctcaagtacgatgcccatatttttgcaaactacggcattaccttgcagggcatt
gcttttgataccttgcttgaatcctatgtgcttgaatcccatatgccacacaatatggac
agcttggccgatcggcatctgggcataaaaacgattcggtatgaagaggtctgcggtaaa
ggggttcaccaaattggctttgatcaagtcgatctcaaaatagccacagactatgccgct
gaggatgctgacattacgttgcgtttgcatttagctttatggccacagattcaggaaagc
cctggtctgttgtacgtatatgaaaagattgagatgcccgccatgcgggtcttgggcatc
atggagcgcaatggtattcggattgattcagccttactctctcgccaagggcaggaagtg
ggcaagcggctactctctttagagggagaaattcatcagctagcgggacaaccttttaat
atccaatcacccaagcagattgctgaaattttattcggacaactagaacttccagtaatt
aaaaagacgccctctggtgcgccatcaacggatgaggaagtattgcaaaagttagccgaa
gactatcccttgcccgcccgtattttggattaccgcagtctggctaaattaatgtcaacc
tatattgagaagttgccacgcatggccgatcctaaaacagggcgcgtacacaccaacttt
tctcaggctaccgcagttacagggcgcttagcgtcgagtgagcccaacttacaaaatatt
cccgtacgcacagaagaaggtcgtcgtattcgtgaagcctttattccggcagagggttgt
aagttgttatcagccgactattctcaaattgaattgcgcatcatggcgcacatcgctgaa
gatgaaaatttgctagcagcatttgctgcagggaaggacgtgcaccaagctactgcagca
gagatttttggggtgccattagatgctgtgaattcagagcagcgtcgctatgccaaggtg
atcaactttggtttaatttacggcatgagtgcctttggcttagcaggcaatctgggaatt
gagcgctctgcagcccaaagctatatcactaaatactttgatcgctacccaggagtagcc
caatatatggagcgaactcgtctagaggcaagagaaaatggttatgtggagaccgtcttt
ggtaggcgtttatggttgccggagattaaaggctctaatggccctcgtcgtcaaggtgct
gagcgcgcagcgattaatgcacccatgcaaggcactgccgcagatctgattaaattggct
atggtggcagtggagaactggttggaaaaggagcaattaaagacccgtatgctcttgcag
gtccatgatgagttggtatttgatgtacctttggatgaattggcgctattgcaggccaag
ttgcctgatctgatgtgtaaagtagcggatctgaaggttcctttagtagttggtattggg
attggcgataattgggaagaagcacattaa
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