Polynucleobacter antarcticus: DCO16_09330
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Entry
DCO16_09330 CDS
T08332
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pani
Polynucleobacter antarcticus
Pathway
pani03420
Nucleotide excision repair
pani03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DCO16_09330
03430 Mismatch repair
DCO16_09330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pani03400
]
DCO16_09330
Enzymes [BR:
pani01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCO16_09330
DNA repair and recombination proteins [BR:
pani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DCO16_09330
MMR (mismatch excision repair)
Other MMR factors
DCO16_09330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QKM63227
UniProt:
A0A6M9PWA4
LinkDB
All DBs
Position
complement(1797854..1800238)
Genome browser
AA seq
794 aa
AA seq
DB search
MYSDLLANLNPEQREAVTLPPSNPQGQSQSALILAGAGSGKTRVLTTRIAWLIQTGQVSP
IGVLAVTFTNKAAKEMMVRLSAMLPINTRGMWIGTFHGLCNRLLRAHHKEAGLPSTFQIL
DTQDQLSAIKRLLKGLKVDDEKYPPKQLQYFIAHAKERGQRARELSVGDDFQAKMAQLYE
AYDAQCQREGVVDFAELLLRSYELLKHSEAIRTHYQERFRHILIDEFQDTNALQYAWLKL
LSGHDAGQINVSGAGSSAVFAVGDDDQSIYAFRGADVENMRLYENQYHPMMVKLEQNYRS
HGHILDTANFLISNNTDRLGKNLRTDAGHGEPVRIYDAPSDHAEAAWLVDEIRALVNSGI
KRTEIALLYRSNAQSRIIEHALFSAAIPYRVYGGLRFFERAEIKHALAYLRLLENPNDDT
SFSRVVNFPTRGIGARSIESVQDAARDQQSSLYLAASTLEGKSGAALSGFVRLVDHMREA
TRHNTLPETVEFVIQNSGLIQHYLSEREGQDRVENLQELINAATAFIAEEGYGQDAAAAM
LPGENAPGVVEVSPLAAFLSHASLEAGDNQAQAGQDAVQLMTVHSAKGLEFTAVFITGLE
EGLFPHENSINEHNGLEEERRLMYVAITRAKERLYLSHTQSRMLHGQVRYNMPSRFLEEL
PADSLKWLTPKVKDARWGGSSGSSSRTGSTWQDGYTRQRDYESNDFFDSGSENRQPAKQI
GRVGSASTTVKRMASPPRGQYPFTIGQNVFHTKFGEGRVTGLEGNDTDARAQVNFKRHGV
KWLQLSIAKLAAID
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtactcagacttgctcgcgaacctcaacccagaacagcgcgaggcagtgaccctcccg
ccctcaaatccccaaggccaatctcagtcagccctcattttggctggtgccggtagcggt
aagacccgcgtcctcactacccgtatagcctggttgatccagacaggccaggtttcaccg
attggcgtcttagcagtgactttcaccaataaggctgccaaagagatgatggtgcgcctg
agcgctatgctcccgatcaatacgcggggcatgtggataggcacctttcatggtctttgt
aaccgtttattacgggcacaccataaagaggctggcctaccctctacctttcagattttg
gacactcaagatcagctatctgccattaagcgtcttttaaagggtttaaaggtcgatgat
gagaaataccctcctaagcagttgcaatactttattgcccatgccaaagagcgtggccag
cgggcgcgtgagctctccgtgggggatgacttccaagccaagatggcgcagctatatgag
gcttatgacgcacagtgtcagcgtgaaggcgtcgtcgactttgctgaactcttattgcga
agctatgaattacttaaacatagcgaagcgatacgcacacattatcaagagcgctttcgt
cacattttgattgatgagtttcaggataccaatgccttgcaatacgcttggctcaaatta
ctctctggtcatgatgccggtcaaatcaatgtcagcggtgctggcagtagtgcagtcttt
gcggtgggtgatgatgatcaaagtatttatgccttccgtggtgctgatgtagagaatatg
cgcctctatgaaaaccaataccatccgatgatggtgaagttagagcaaaactatcgctcc
cacggacatattctcgacaccgcgaatttcttgatttctaataacaccgaccgtctagga
aaaaaccttcgtaccgatgcgggtcatggcgagcctgtgcgtatttacgatgcaccaagt
gatcatgctgaagcggcttggctagttgatgaaattagagctctagtgaacagcggcatc
aaacgcacggagatcgccttgctttacagaagtaatgcgcaatcccggattattgaacat
gccttattttcggcagctattccctatcgtgtgtatggtggcttgcgcttcttcgagcgt
gctgagattaagcatgctttagcctacctccgtcttttagaaaacccgaacgacgatact
tccttctcgcgggtggtgaattttcctacgcggggtatcggggcgcgatcgattgaatct
gtgcaagatgcagccagagatcaacaatcctctttgtatctagccgcctctaccttagag
ggtaaatcaggggctgctctcagcggatttgttcgtttagtagatcacatgcgtgaagcc
acccgtcacaacaccttacccgaaacagtggagtttgtgattcaaaatagtggtttgata
caacactatctttcagagcgcgagggacaagaccgcgtagagaacttacaagaattaatc
aatgcagcaacggcttttattgcggaagagggttatggtcaggatgcggctgcagccatg
ttgcctggtgaaaacgcaccgggtgtcgtagaggtgtcgccattagctgctttcttatcc
cacgcttccctagaggctggcgataaccaagcacaagcagggcaagatgcagtgcaatta
atgacagtgcattcagccaaaggtttggagttcacagcagtatttattactggcctagag
gaaggtttatttcctcatgagaacagtattaatgagcacaatggtttggaggaagagcgc
cgcctgatgtatgtggctatcacccgtgctaaagagcgtttatatctctcgcacacccag
tcacgcatgctgcatggccaagtacgttacaacatgccttctcgttttttagaagagcta
ccagcggattcattaaagtggttgacacccaaagtgaaagacgcgcgttggggcggtagt
agcggtagcagcagtcgcacaggatctacttggcaagatggttatacccgtcaacgggat
tatgagtcgaatgatttttttgattctggtagtgagaacaggcaacccgccaagcaaatt
ggtcgtgtaggttcagcatctaccaccgtcaaaagaatggcgtcaccaccacggggtcag
taccccttcactattgggcagaatgtttttcataccaagtttggcgaaggccgtgtgaca
ggcttagagggcaacgacacagatgcgcgcgctcaggtgaacttcaagcgccatggtgtg
aaatggttacagctcagtatcgctaagttggctgcgattgattaa
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integrated database retrieval system