KEGG   Polynucleobacter antarcticus: DCO16_09330
Entry
DCO16_09330       CDS       T08332                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pani  Polynucleobacter antarcticus
Pathway
pani03420  Nucleotide excision repair
pani03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pani00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DCO16_09330
   03430 Mismatch repair
    DCO16_09330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pani03400]
    DCO16_09330
Enzymes [BR:pani01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DCO16_09330
DNA repair and recombination proteins [BR:pani03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DCO16_09330
   MMR (mismatch excision repair)
    Other MMR factors
     DCO16_09330
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_12 PcrA_UvrD_tudor Viral_helicase1 AAA_30 AAA_11 ResIII
Other DBs
NCBI-ProteinID: QKM63227
UniProt: A0A6M9PWA4
LinkDB
Position
complement(1797854..1800238)
AA seq 794 aa
MYSDLLANLNPEQREAVTLPPSNPQGQSQSALILAGAGSGKTRVLTTRIAWLIQTGQVSP
IGVLAVTFTNKAAKEMMVRLSAMLPINTRGMWIGTFHGLCNRLLRAHHKEAGLPSTFQIL
DTQDQLSAIKRLLKGLKVDDEKYPPKQLQYFIAHAKERGQRARELSVGDDFQAKMAQLYE
AYDAQCQREGVVDFAELLLRSYELLKHSEAIRTHYQERFRHILIDEFQDTNALQYAWLKL
LSGHDAGQINVSGAGSSAVFAVGDDDQSIYAFRGADVENMRLYENQYHPMMVKLEQNYRS
HGHILDTANFLISNNTDRLGKNLRTDAGHGEPVRIYDAPSDHAEAAWLVDEIRALVNSGI
KRTEIALLYRSNAQSRIIEHALFSAAIPYRVYGGLRFFERAEIKHALAYLRLLENPNDDT
SFSRVVNFPTRGIGARSIESVQDAARDQQSSLYLAASTLEGKSGAALSGFVRLVDHMREA
TRHNTLPETVEFVIQNSGLIQHYLSEREGQDRVENLQELINAATAFIAEEGYGQDAAAAM
LPGENAPGVVEVSPLAAFLSHASLEAGDNQAQAGQDAVQLMTVHSAKGLEFTAVFITGLE
EGLFPHENSINEHNGLEEERRLMYVAITRAKERLYLSHTQSRMLHGQVRYNMPSRFLEEL
PADSLKWLTPKVKDARWGGSSGSSSRTGSTWQDGYTRQRDYESNDFFDSGSENRQPAKQI
GRVGSASTTVKRMASPPRGQYPFTIGQNVFHTKFGEGRVTGLEGNDTDARAQVNFKRHGV
KWLQLSIAKLAAID
NT seq 2385 nt   +upstreamnt  +downstreamnt
atgtactcagacttgctcgcgaacctcaacccagaacagcgcgaggcagtgaccctcccg
ccctcaaatccccaaggccaatctcagtcagccctcattttggctggtgccggtagcggt
aagacccgcgtcctcactacccgtatagcctggttgatccagacaggccaggtttcaccg
attggcgtcttagcagtgactttcaccaataaggctgccaaagagatgatggtgcgcctg
agcgctatgctcccgatcaatacgcggggcatgtggataggcacctttcatggtctttgt
aaccgtttattacgggcacaccataaagaggctggcctaccctctacctttcagattttg
gacactcaagatcagctatctgccattaagcgtcttttaaagggtttaaaggtcgatgat
gagaaataccctcctaagcagttgcaatactttattgcccatgccaaagagcgtggccag
cgggcgcgtgagctctccgtgggggatgacttccaagccaagatggcgcagctatatgag
gcttatgacgcacagtgtcagcgtgaaggcgtcgtcgactttgctgaactcttattgcga
agctatgaattacttaaacatagcgaagcgatacgcacacattatcaagagcgctttcgt
cacattttgattgatgagtttcaggataccaatgccttgcaatacgcttggctcaaatta
ctctctggtcatgatgccggtcaaatcaatgtcagcggtgctggcagtagtgcagtcttt
gcggtgggtgatgatgatcaaagtatttatgccttccgtggtgctgatgtagagaatatg
cgcctctatgaaaaccaataccatccgatgatggtgaagttagagcaaaactatcgctcc
cacggacatattctcgacaccgcgaatttcttgatttctaataacaccgaccgtctagga
aaaaaccttcgtaccgatgcgggtcatggcgagcctgtgcgtatttacgatgcaccaagt
gatcatgctgaagcggcttggctagttgatgaaattagagctctagtgaacagcggcatc
aaacgcacggagatcgccttgctttacagaagtaatgcgcaatcccggattattgaacat
gccttattttcggcagctattccctatcgtgtgtatggtggcttgcgcttcttcgagcgt
gctgagattaagcatgctttagcctacctccgtcttttagaaaacccgaacgacgatact
tccttctcgcgggtggtgaattttcctacgcggggtatcggggcgcgatcgattgaatct
gtgcaagatgcagccagagatcaacaatcctctttgtatctagccgcctctaccttagag
ggtaaatcaggggctgctctcagcggatttgttcgtttagtagatcacatgcgtgaagcc
acccgtcacaacaccttacccgaaacagtggagtttgtgattcaaaatagtggtttgata
caacactatctttcagagcgcgagggacaagaccgcgtagagaacttacaagaattaatc
aatgcagcaacggcttttattgcggaagagggttatggtcaggatgcggctgcagccatg
ttgcctggtgaaaacgcaccgggtgtcgtagaggtgtcgccattagctgctttcttatcc
cacgcttccctagaggctggcgataaccaagcacaagcagggcaagatgcagtgcaatta
atgacagtgcattcagccaaaggtttggagttcacagcagtatttattactggcctagag
gaaggtttatttcctcatgagaacagtattaatgagcacaatggtttggaggaagagcgc
cgcctgatgtatgtggctatcacccgtgctaaagagcgtttatatctctcgcacacccag
tcacgcatgctgcatggccaagtacgttacaacatgccttctcgttttttagaagagcta
ccagcggattcattaaagtggttgacacccaaagtgaaagacgcgcgttggggcggtagt
agcggtagcagcagtcgcacaggatctacttggcaagatggttatacccgtcaacgggat
tatgagtcgaatgatttttttgattctggtagtgagaacaggcaacccgccaagcaaatt
ggtcgtgtaggttcagcatctaccaccgtcaaaagaatggcgtcaccaccacggggtcag
taccccttcactattgggcagaatgtttttcataccaagtttggcgaaggccgtgtgaca
ggcttagagggcaacgacacagatgcgcgcgctcaggtgaacttcaagcgccatggtgtg
aaatggttacagctcagtatcgctaagttggctgcgattgattaa

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