Polynucleobacter antarcticus: DCO16_09825
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Entry
DCO16_09825 CDS
T08332
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
pani
Polynucleobacter antarcticus
Pathway
pani00020
Citrate cycle (TCA cycle)
pani00640
Propanoate metabolism
pani00660
C5-Branched dibasic acid metabolism
pani00720
Other carbon fixation pathways
pani01100
Metabolic pathways
pani01110
Biosynthesis of secondary metabolites
pani01120
Microbial metabolism in diverse environments
pani01200
Carbon metabolism
Module
pani_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pani_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DCO16_09825
00640 Propanoate metabolism
DCO16_09825
00660 C5-Branched dibasic acid metabolism
DCO16_09825
09102 Energy metabolism
00720 Other carbon fixation pathways
DCO16_09825
Enzymes [BR:
pani01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
DCO16_09825
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GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
CPSase_L_D2
GARS_A
CIDE-N
DUF7736
Motif
Other DBs
NCBI-ProteinID:
QKM63311
UniProt:
A0A6M9PSM5
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All DBs
Position
complement(1910094..1911260)
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AA seq
388 aa
AA seq
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MKIHEYQGKELLRQFNVPVPNGIPAFSVDEAIKVAEKLGGPVWVVKAQIHAGGRGKGGGV
KLAKSMDEVKKYASEILGMQLKTHQTGPEGQKVNRLLIEDGADIKKEYYFSIVTDRGTQK
NVIMASSEGGMDIEEVAESHPEKIIKVFVDPLIGLTDADCQIIAKGIGVPDASIPMASDV
FKNLYKTYWETDASLVEINPLILEGNGKIKALDAKFNFDPNALFRHPEIVAYRDIDEEDP
AEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVGGGATAEKVTE
AFKIMLKNKSVEAILVNIFGGIMRCDVIADGVVSACKAVNLTVPLVVRMKGTNEELGKKI
LADSGLPIISADSMAEAATKVVAAVAKK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcatgagtaccagggtaaagagcttttacgccaatttaatgtgcctgtccct
aatggcattccagcatttagcgttgacgaggctatcaaggtcgctgagaaattaggcggc
cctgtatgggttgttaaagcacaaattcatgcaggtggtcgcggtaaaggcggcggtgtg
aaattagcgaagagcatggatgaggtaaagaaatacgcttctgaaattttggggatgcag
ctcaaaacacatcagactggtccagaaggtcaaaaagtaaatcgcctgttgattgaagat
ggtgcagatattaaaaaagagtattacttcagtatcgtgactgatcgcggcacacagaag
aatgtgatcatggcgtccagtgaaggcggcatggatattgaggaagttgccgaatctcac
ccagaaaaaattatcaaagtgtttgttgatccattaatcggcttaacggatgcggattgc
caaatcattgctaagggtattggcgttccagatgcttccattcctatggcaagcgatgtg
ttcaagaacctctataaaacctattgggaaaccgatgcttcattggtggagatcaaccca
ttaatccttgaagggaatggcaagattaaagccttagatgcgaaatttaatttcgaccca
aatgctttatttcgtcatcctgagatcgtggcttatcgtgatatcgatgaagaagatcca
gcggaaattgaagcctctaaatttgatttagcctacatctcactagatggcaatattggt
tgcttagtcaatggcgccggccttgcaatggcaacaatggataccatcaagttattcggt
ggtgagccagccaacttcttagatgtgggtggtggtgctactgcagaaaaagtgaccgaa
gcgttcaagatcatgctcaagaataagagcgtagaagcgatcttagtaaacatttttggc
ggcattatgcgttgcgatgtgattgcggatggtgtggtgagtgcctgtaaggcagtcaat
ctcaccgttcctttggttgtgcgcatgaagggtacaaatgaagagttgggcaagaagatt
cttgcagactcaggcttacccatcattagtgccgattcaatggctgaggcggctaccaaa
gtagttgctgccgttgctaaaaaataa
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