Pseudidiomarina andamanensis: D3795_02355
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Entry
D3795_02355 CDS
T10146
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
panm Pseudidiomarina andamanensis
Pathway
panm03410
Base excision repair
panm03430
Mismatch repair
panm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
panm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D3795_02355 (recJ)
03430 Mismatch repair
D3795_02355 (recJ)
03440 Homologous recombination
D3795_02355 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panm03400
]
D3795_02355 (recJ)
DNA repair and recombination proteins [BR:
panm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
D3795_02355 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D3795_02355 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D3795_02355 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
QGT95081
UniProt:
A0AA92ERN3
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All DBs
Position
483257..484972
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AA seq
571 aa
AA seq
DB search
MMTDISIQRRPKVEVGDWAAGLPPLLAQILARRGIAEAQQLDLGAKQLPHFNLLKGTDVA
AKILADAIARQQAICICGDFDADGATSTALMVSVLQALSAQRVSYIVPNRFADGYGLSPA
VVAQAQQQGAEIIVTVDSGISCHAGVAAAKAAGMTVIITDHHLPGAQLPNADVIVNPNQP
NCEFPSPNIAGVGVAFYVLLALRNELRERGIETPNLAQWLDLVAVGTVADVVKLDGVNRI
LVQQGLQRIRAGYCRPGIAALLQVANRDPQQLQASDLGFAIGPRINAAGRLDDMAAGIEC
LLAQNLAQAQELASQLDALNKARRNIETEMREEAEAYVAQLNADGDRLPAALVLYQAGWH
QGVVGIVAGRVKEQCHRPVIAFADSDDGYLKGSARSIPGLHIRDVLERVHSLYPHLIERF
GGHAMAAGLSLAHENLNEFRQAFTQQVEIWLGDEELTRTIWSDGELDADYLQEPFVRQLE
AYGPWGQGFPEPIFDGEFRIVDHRVVGERHLKLVLETPQRVVVDAIAFNIDLKIWPDDSV
QRLHAAYKVQLNHFRGRTSVQLQLEHFYALR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagatatcagcatacaacgtcgccccaaagttgaagttggggattgggctgcg
ggattgccaccattgcttgcacaaatactcgcgcgccggggtattgccgaagctcagcaa
cttgatctcggcgccaaacagctaccgcactttaatttgcttaaaggtaccgacgtcgct
gcaaaaattcttgccgacgcgattgcgcggcaacaagcgatatgtatctgtggcgatttt
gatgccgatggcgccacctcgacggcattgatggtttcggtactccaagctctcagtgcc
caacgggtgagctatattgttccgaaccgttttgccgatggatatgggctatcgcctgcg
gttgtcgcgcaagcgcagcaacaaggcgcggagattatcgtgacggttgatagcggtatt
tcgtgtcacgctggcgtagcagcagcgaaagctgcgggtatgacggtgattattactgat
caccacttgcctggtgctcaattgccgaatgccgatgtcattgtcaatccgaatcaacca
aactgtgagtttcctagccccaatattgcgggggtaggcgttgcattttatgtgttatta
gcgttacgcaatgaattgcgtgagcgcggcattgaaacaccgaatttagcgcaatggctc
gacttagttgctgtcggaaccgttgccgatgtggttaaacttgatggtgttaaccgtatt
ttagtgcagcaaggtttacaacgcattcgggctggttattgtcgaccgggcatcgctgca
ttacttcaggttgcgaaccgtgatccgcagcagcttcaggctagtgaccttgggttcgca
atcggtccgcgaataaatgctgcaggtcggttagatgatatggccgctggtattgaatgc
ttgctcgcgcaaaatctagcgcaggcgcaagaattagcctcacaactcgatgcattgaat
aaagcacgccgcaatatcgaaactgaaatgcgtgaagaagctgaagcttatgtggcgcaa
cttaatgccgacggtgatcggttaccagcagcgttagtactgtatcaagctggctggcat
cagggagtggttgggattgttgcgggccgagtgaaagaacagtgccaccgaccggtcata
gcctttgctgacagtgacgatggttatttaaaggggtcagcacgctccattccggggtta
catatccgcgatgtgttagaacgtgtgcatagtttgtatccgcatttaattgaacgcttt
ggtggtcatgcgatggcggctggattatccctcgcgcacgaaaacttaaacgaatttcgg
caagcatttacgcaacaggttgaaatttggctaggcgacgaggagcttactcgcacaatt
tggtcggacggagagctcgatgccgattacctacaagaaccgtttgtacgccaactggaa
gcttatggtccgtggggacaaggttttccggagcctatttttgatggtgagtttcgcatc
gtggatcaccgggtggttggtgagcgtcatttgaaattggtgcttgaaacgccacagcgc
gtggttgttgatgcgattgcatttaacattgatttaaaaatctggccagatgattctgtg
cagcgattgcatgctgcctataaagtccaattaaatcactttcgtggacgcacttctgtg
cagctacaactagagcatttttacgctttgcggtag
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