Pseudidiomarina andamanensis: D3795_04840
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Entry
D3795_04840 CDS
T10146
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
panm Pseudidiomarina andamanensis
Brite
KEGG Orthology (KO) [BR:
panm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
panm01011
]
D3795_04840
Enzymes [BR:
panm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
D3795_04840
Peptidoglycan biosynthesis and degradation proteins [BR:
panm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
D3795_04840
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
NMB0315_dom_I
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
QGT95545
UniProt:
A0AA92EUN5
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All DBs
Position
1005209..1006825
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AA seq
538 aa
AA seq
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MMYMKKWLAIAISSGLLSGCSVLPWQSDSADTDVSVKTVPEEPVATPVAEAKPHSLEPEE
IVSEPVEVELTPQQEADLWFRIKRQLTFEAPEVPRLVSQRNWYLKHPTYMERVAKRAQPF
MYLIVDEIERRNMPLELALLPIVESAFDPFAYSHGRAAGVWQFIPGTARHYGLEINWWYD
GRRDVYAATHAALDYLDALQKRFDGDWLHALAAYNSGEGRVANAIRKNKRAGKPTDFWSL
DLPRETRAYVPKLLALADILKNYDDYAQHWLPIDNKPYLAIVEAQSQIDLAKAAEMAELD
LDTLHHYNSAYNRWATDPVGPHRLLLPIEHAEKLQTWLANADSKDLVQWTRHKVKSGESL
LVIAKQYHTTAKAIQQANNISGHIIRAGDHLLVPIATRDLDDYSLSAEQRLVTKQSESRG
AFKVEHEVVRGDTLWDISREYNVNLRKLASWNGMAPTDPLRPGRKLVVWLPQSEKPSGVV
RSLNYKVRSGDSLARIASRFNVTIADIEKWNQISRSNYLQPGQQLKLYVDVTRLNTQS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacatgaaaaaatggttagcgatagcaatttcctctggcttacttagcggttgt
tcggtattaccgtggcaaagcgactccgctgacaccgacgttagtgtaaagacggttcca
gaggaacctgttgctacgccggtcgctgaagcgaaaccccattcgcttgagcctgaagaa
attgtcagtgaacctgttgaagttgagctaacgccacaacaagaagctgatttatggttt
cgtattaagcgccagctgacgtttgaagcacctgaggttccgcgccttgtcagccagcgt
aattggtacctgaagcacccaacctatatggagcgagttgctaaacgtgcccaacctttc
atgtacttaattgttgacgaaattgagcggcgaaatatgcctctcgaattagcgcttctg
ccaattgtagagagtgcttttgatccatttgcctactcgcatgggcgcgcagccggcgtt
tggcagtttattccaggaactgcgcgccattatggcttagaaatcaattggtggtacgac
ggccgccgtgatgtttatgctgctacccatgcagcgcttgattatctcgatgcccttcag
aaacgtttcgacggtgattggttgcacgctcttgcggcatataactctggcgaaggtcgc
gtggcgaatgctattcgtaagaataagcgagctggcaaaccaactgatttttggtcactt
gatttgccacgcgaaacaagagcctatgtcccgaaactgttggcattggctgatatttta
aaaaattatgacgactacgcacaacactggctacctatcgacaataagccctatttagcc
attgtcgaagcgcaaagccagatcgatttagcgaaagccgcagaaatggctgagctcgat
ttagataccttgcaccattacaactcagcctataatcgctgggcaactgatccggtgggt
ccgcaccgcttgttactacctattgaacacgccgagaaattgcaaacttggttagctaat
gccgatagcaaagaccttgttcaatggactcgtcataaagtgaaatcgggtgaaagcttg
ttagttatcgcgaagcaatatcatacaacggcaaaagcgattcagcaggcaaacaatatt
tccggtcatatcattcgcgctggcgaccacttattagtgccgatcgctacccgtgatcta
gatgattacagcctgtcggcagagcaacgattagtgacgaaacagtcagaatctcgaggc
gcctttaaggtagaacacgaagttgtgcgcggcgacaccctttgggatattagtcgtgaa
tacaacgtcaacttacgtaaattagcgagttggaatggcatggctccgactgacccatta
cgcccgggtagaaagctagtggtgtggttgccgcagtcagaaaaaccgtctggcgttgta
cgtagcctgaactacaaagtgcgctcaggtgattcactggcacgcattgcttcgcgcttc
aatgtcactattgccgatattgaaaagtggaatcaaattagtagaagtaattacttgcag
ccgggtcagcaactcaaactttatgttgacgtgacccgactcaatacgcagtcttaa
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