Pseudidiomarina andamanensis: D3795_07285
Help
Entry
D3795_07285 CDS
T10146
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
panm Pseudidiomarina andamanensis
Pathway
panm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
panm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D3795_07285 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panm03400
]
D3795_07285 (recD)
Enzymes [BR:
panm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D3795_07285 (recD)
DNA repair and recombination proteins [BR:
panm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D3795_07285 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
PhoH
UvrD_C
AAA_16
PIF1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QGT95973
UniProt:
A0AA92EU91
LinkDB
All DBs
Position
complement(1518919..1520853)
Genome browser
AA seq
644 aa
AA seq
DB search
MLENLQLWYQHGWIRAIDLSFAQQLAKQLEDDQEAVVLLAAFVSYQLGRGHPCLDLAQLY
AEPEQTLGLPPEHASVESLQACELPQQLLCNVAGAESLESAVQVLLESPAVNNDNSPLVL
QGQRLYLRRYFRYEQQIKTDLAARMKALQPVNLGQLKHVLDELFGTQQTISWQRTACAMA
MRSLFTIVTGGPGTGKTYTVVRLLATLQKLRGQPEPLRIRLAAPTGKAAARMSESIGNEL
LTLTSIDDVKADIPTEAVTLHRLLGTLPNSRSFRHHKDNPLHTDVVIIDEASMVDIEMMA
AVVNALPPRARLILLGDKDQLASVEAGAILGQLCEQAEHGHYTPELTEWLNATTNVALPT
DKTDASGAEWPYLQHTTMFHESRRFDPNKGIGKLADEVNRQQHVWLEQWLQDSDAMAAAH
VEFDNIRMRAVPRPNHQSVQQLVEQGYAPLLKLIETRPESRNAEEIDVWAAKILKQLEQF
QILTAVREGEWGMHQFNQRISYWLFGDQAAEHGWFEGRPVMVTHNDYSLDLRNGDIGIVL
RREPNEPLRVAFPTTDGTIRWLLPSRLTQVDTAFAMTIHKSQGSEFSHTVMVLPEHDVPI
LTKELLYTGITRAKQQFTMVCAHPQLVLKAVRRRIQRSGGLANG
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaaatctgcaactttggtatcagcatggctggattcgagcgattgacctcagc
tttgcgcagcaattagctaagcaacttgaggacgatcaagaggctgtggtgttattagct
gcattcgtgagttatcagctgggacgtgggcatccgtgtctcgatttagctcagttatac
gctgaacctgagcaaacgcttggcttgcctccagaacatgcatcggttgagagtctgcag
gcgtgtgaactaccgcaacagctgttatgcaacgtcgcgggagcagaatcattggagagt
gcagtgcaggtgttgctggaatcaccagcggttaacaatgataacagtcctttagtgttg
caaggacaacgcttgtatctgcgtcgatattttcgttacgaacagcagattaaaaccgac
ttagcagcacgtatgaaagcgctgcaaccggttaatcttgggcaattgaagcatgtttta
gatgagttgtttggtacccaacaaaccatcagttggcaacgcaccgcatgtgcgatggcg
atgcgtagcttgttcactattgtaactggtggcccaggtaccggaaaaacctatactgtt
gtgaggcttttagccacgttgcaaaaattgcgagggcagccagaaccgttgcgaattcgg
ctcgctgcaccaaccggcaaagcagccgcgcgaatgagtgaatctataggcaacgaatta
cttacgttaacgagtattgatgatgtgaaggccgacattccaaccgaggcggttacgtta
caccggttacttggaacattgccgaatagtcgcagttttcgccatcacaaagataacccg
cttcataccgatgtcgtcattattgatgaagcatcgatggtagatattgaaatgatggct
gctgttgttaatgcgcttccgccgcgggcacggctcattttactcggggataaagatcaa
ttggcttcggttgaggctggcgccattttaggccagttgtgcgaacaggccgagcacggg
cattacacgccagagttaactgaatggttaaatgcgacgaccaatgtcgcgttaccaacg
gacaaaaccgatgcaagcggcgctgaatggccctacttgcaacataccaccatgtttcat
gaaagccgccgctttgatcctaataagggcattggcaaattagccgatgaagtgaatcgg
cagcaacatgtttggttggagcaatggttgcaagacagtgacgcaatggctgcagcgcac
gttgaatttgataacatacgaatgcgcgccgtaccacggccgaatcaccagtcggttcaa
caactggttgaacagggctatgcgcccttattaaagttaattgagacacgacccgaatca
agaaacgctgaagaaattgatgtttgggctgcaaaaattctcaagcaactcgagcaattt
cagatactaacagctgtacgcgaaggcgaatgggggatgcaccaatttaatcaacgcatt
agctactggctattcggtgatcaagccgccgagcatggctggtttgaaggccgcccagtg
atggtgacccacaacgattacagtcttgatttgcgtaatggtgatattggtatcgtccta
cgccgtgaaccgaatgaaccattgcgtgttgcttttccaaccacagatggcaccatacgt
tggttgttacccagccgtcttacgcaagttgatacagcatttgcgatgacgattcacaaa
tcgcaagggtcggaattttctcatacggttatggtgttacccgagcatgatgtaccaatt
ctaactaaagaattgttatacaccggtattacccgtgctaaacagcagtttactatggtc
tgtgcgcatcctcagttagtattaaaagcggttcgccggcggatacaacgaagtggaggc
ttagccaatgggtga
DBGET
integrated database retrieval system
