Pseudidiomarina andamanensis: D3795_08345
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Entry
D3795_08345 CDS
T10146
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
panm Pseudidiomarina andamanensis
Pathway
panm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
panm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D3795_08345 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
panm03019
]
D3795_08345 (recQ)
03400 DNA repair and recombination proteins [BR:
panm03400
]
D3795_08345 (recQ)
Enzymes [BR:
panm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D3795_08345 (recQ)
Messenger RNA biogenesis [BR:
panm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D3795_08345 (recQ)
DNA repair and recombination proteins [BR:
panm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D3795_08345 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QGT96846
UniProt:
A0AA92EVX6
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All DBs
Position
complement(1761647..1763488)
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AA seq
613 aa
AA seq
DB search
MPSIGDAILSESVLSQLLADVFGYTAFREGQLQVIEAVQQQRDALVLMPTGGGKSLCYQL
PALNSDGLTVVISPLISLMQDQVEALQTMGVAAAALNNGLTPEQSNQIMQQLNSNQIRLL
YVSPERAMQSFFIRLLQQWPVTLVAIDEAHCISQWGHDFRPEYGQLGQLRETLPNVPFMA
LTATADAATEADIISRLHLHDPVVYKGSFDRPNIRYVVEEKYKPYKQVTDYIKKQRGASG
IVYCGSRKKVEELAEKLQREGLRAAGYHAGMEHDQRESVLRGFVRDDIDVVVATVAFGMG
INKPNVRFVVHFDVPRSVEGYYQETGRAGRDGLPAEAVLLYDPSDAAWIKSIIHDHPDEE
RRRIELHKFTAMQAMSEAQTCRRLVLLNYFNEYRDKPCGNCDICLDPPRQYDGTVDAQKV
LSCVYRVSQRFGMNHVIDVLRGSKSQRLMELGHDKLSTYGIGAEQSHEYWLGVVRQLIHR
GLVIQNVQQYGVLQLTDAARPVLRGEVALQLAEPRINLVVSKPRVADRGDYDKVLFRRLR
ALRKAIADTEEVPPFVVFNDTSLVEMAVSYPTDETAMLAITGVGQKKLERYGQEFIAAIT
AYLDADDEPISNF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
ttgccgtcaattggagacgctattttgtctgaatctgtgctgtcacaacttcttgccgat
gtatttggctacaccgcgtttcgcgaaggccaactgcaggtgattgaagccgtgcaacaa
cagcgcgatgccttagtactcatgccgaccggcggtgggaaatcgctttgctatcaactg
ccagcattaaactcagacggcttgacggtggtgatttcacccttgatcagcttgatgcaa
gaccaagtcgaagctttgcaaaccatgggggttgccgctgctgcacttaataacggactc
acgcccgagcaaagcaatcagatcatgcagcagcttaatagtaaccaaatacggttactt
tatgtgagtcctgagcgtgctatgcagagtttcttcattcgcttgttacaacaatggccg
gtgaccctggtagcaattgatgaggcgcactgtatttcccagtggggacacgattttcgg
cccgaatatggtcaactcggccaacttcgcgaaaccctgccgaatgtgccgtttatggca
ttaacagcaaccgcggatgccgcaaccgaagcggatattattagccgcctacatttgcat
gatccggtggtatataaaggctcgtttgatcgccctaatattcgctatgtggttgaagaa
aaatacaaaccttataagcaggtgacggactacattaagaagcagcgtggtgcttcaggt
atcgtttattgtggtagtcgcaagaaagttgaagagcttgctgaaaagctccagcgtgaa
ggcctgcgtgccgccggttaccatgccggcatggagcatgaccaacgtgagagcgtactg
cgtggctttgtacgtgacgatattgatgtggtggtggcaaccgtggcgtttggcatgggc
attaacaagccgaacgtgcgttttgtggtgcactttgatgtgccgcgcagtgttgaaggt
tattaccaagaaaccggccgtgctggtcgtgatggcttacccgccgaagccgtgctgctc
tatgacccttcagatgccgcttggatcaaatcgattatccacgaccatccagatgaagag
cggcgtcgtattgagctgcataagttcaccgctatgcaagcaatgagcgaggcacaaacc
tgccgccgcttagtgttactcaactattttaatgaataccgtgataaaccttgtgggaac
tgcgacatttgtctggacccaccgcgccaatacgatggtaccgtcgatgcgcaaaaagtg
ctgtcatgtgtttatcgggttagtcagcgctttgggatgaatcatgtgattgatgtgttg
cgtgggagtaaatcacagcggctcatggaattggggcatgacaaactatcaacctatggt
attggtgctgaacaaagccacgaatactggctaggcgtggtgcgtcagctcattcatcgt
ggtttggtgattcaaaatgtgcagcagtatggtgtgctgcaactgaccgatgcggcgcgt
cccgtgctacgaggtgaagttgccttacagcttgctgagccgcgaatcaatttggtggtc
agcaaacctcgcgtggctgatcgtggcgattacgataaagtgctgttccgtcgtttacgc
gcgctacgaaaagctattgcagacactgaagaagtaccgccgtttgtggttttcaatgac
accagcttagtggaaatggcggttagttatcccaccgacgaaaccgccatgttggcaatc
accggcgtgggtcaaaagaaactagaacgctacggccaagagttcatcgccgcgattacg
gcctatttagacgccgacgatgaacccatcagtaacttttaa
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