Pseudidiomarina andamanensis: D3795_08355
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Entry
D3795_08355 CDS
T10146
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
panm Pseudidiomarina andamanensis
Pathway
panm03420
Nucleotide excision repair
panm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
panm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D3795_08355
03430 Mismatch repair
D3795_08355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panm03400
]
D3795_08355
Enzymes [BR:
panm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D3795_08355
DNA repair and recombination proteins [BR:
panm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D3795_08355
MMR (mismatch excision repair)
Other MMR factors
D3795_08355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_12
AAA_30
AAA_22
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QGT96166
UniProt:
A0AA92IM44
LinkDB
All DBs
Position
complement(1764484..1766679)
Genome browser
AA seq
731 aa
AA seq
DB search
MQHHPLLAQLNDKQREAVGAAERHMLVLAGAGSGKTRVLVHRIAWLIQEKGISPHSIMAV
TFTNKAAAEMRGRIEQLLGSSVRSMWIGTFHGLAHRLLRAHYMDVGLPQNFQILDSDDQL
RLVKRIMRSLNLDEKRWPPKQAQWFINGKKDEGLRPHHLDGYDFNERTLKEIYEAYQVAC
DRAGLVDFAELLLRAHELIRDNKHVREHYQRRFRHLLVDEFQDTNAIQYGWIKLLSGVGQ
GYDETNHVTIVGDDDQSIYGWRGAKVENIQQFLRDFPNVLTIRLEQNYRSTNNILTAANE
VIANNQGRLGKELWTDGSAGEPIDLYAAFNEMDEARYIAGRIEQWHEQGNALQDVAILYR
SNAQSRVLEEALLHARIPYRIYGGLRFFDRMEVKDALAYMRLVASRNDDAAFERVINTPT
RGIGDRTLGIIREGSRERGLPMWEAAKQLVHEKILSGRAGNAVQAFLELIDGLEDETSDY
PLGRQVDTAIKKSGLMAMFQAEKGEKAETRVENLKELVNACDNFNTLDSVIEDEMTPLNA
FLAHAALESGEEQADEHQDAVQLMTLHSAKGLEFPLVFMSGVEEGLFPSQQSIGESGRLE
EERRLCYVGMTRAMQKLVISYAESRRIYGQEKHSTVSRFVGEMPPEMIHHVRLQSRTSHQ
SHALGRFHSGASHEAFEQTGYTLGQRVRHTKFGEGTVLNYEGTGPQSRIQVNFDEVGSKW
LVVGYARLERC
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcacccattactcgcacaactgaacgacaaacaacgtgaagccgttggcgca
gcagagcgtcacatgttggtccttgccggcgctggcagtggtaaaactcgggtgttggtg
caccgcattgcttggctgattcaagaaaaaggtatttcgccgcatagcattatggcagtg
acctttaccaacaaagccgcagcggaaatgcgtggacgtattgagcaattattaggaagc
tcggtgcggtcgatgtggattggtaccttccatgggcttgcccaccgtcttctccgtgcc
cattacatggatgtggggttaccgcagaattttcaaattctcgatagcgatgatcagcta
cgtttggtcaaacgcatcatgcgcagcttaaacttagacgaaaaacgttggccgcccaaa
caggcgcaatggtttatcaacggcaaaaaagacgaaggtttgcgtccgcatcatcttgac
ggctatgactttaatgagcgcacgctaaaagaaatttacgaagcctatcaagttgcctgt
gaccgtgcgggcttggttgatttcgctgaattattactgcgagcgcatgaattgattcgt
gacaacaaacatgtgcgcgagcattaccagcgccgtttccgccatcttttggtggacgag
ttccaagataccaacgccattcaatatggctggattaaactgctttcaggtgtcggccag
gggtacgacgagaccaatcatgtcaccatagttggtgacgatgatcagtcaatttatggc
tggcgcggcgcaaaggttgaaaatattcagcagtttttacgtgattttccgaacgtttta
accattcgattggagcaaaactatcgctccaccaataatattctaaccgcggcaaacgaa
gtgatcgcgaataaccaagggcgcctcggtaaagagttatggacagacggcagcgcgggc
gagccgattgatttatatgccgcattcaatgaaatggacgaagcgcgatacattgcgggg
cgcatcgagcaatggcatgagcagggtaatgcgctacaagatgtcgccattttatatcgc
agtaacgcacaatcgcgtgtactggaagaagccttactgcatgcccgaattccttatcgc
atttatggcgggttacgcttctttgaccgcatggaagttaaagatgccttggcgtatatg
cgcttagtggcgagtcgtaatgatgatgcggcgtttgaacgcgtgattaataccccaacg
cggggtattggtgaccgaacgcttggtattatccgcgaaggttcacgtgaacgcggattg
ccgatgtgggaagcggcgaaacagttggtacatgaaaaaattctcagtggtcgtgccggt
aacgccgtgcaggcattccttgagttaattgatggccttgaagacgaaaccagtgattat
ccgttgggccgccaagtggatactgcgatcaagaaaagcggtttaatggcgatgttccaa
gctgaaaaaggcgagaaagcggaaactcgcgtcgaaaacttaaaagagcttgtgaacgct
tgtgacaacttcaatacgctcgacagtgtgattgaagatgaaatgacgccactcaatgcc
ttcttagcgcatgctgcattggaatcgggtgaagagcaagccgatgaacatcaagatgcg
gtgcaattaatgacattacatagcgccaaaggcctcgaattcccgttggtgtttatgagc
ggcgtagaagaaggtttatttccgtcacaacaatccattggcgagagtggccgactcgaa
gaagagcgtcgcctctgctacgtgggcatgacccgtgccatgcaaaaactggtaattagc
tacgccgagtcgcgtcgcatttacggtcaagagaagcatagtacggtgagccgctttgtg
ggcgaaatgcctccggaaatgattcatcatgtgcgcttacagtcacgaacctcgcatcaa
tcgcatgcgcttggccgttttcatagtggcgcaagccatgaagcctttgagcaaacgggt
tataccctaggtcaacgtgtacgtcataccaaatttggtgaaggtacggtacttaactat
gaaggcaccggcccacaaagtcgcattcaagtgaatttcgacgaagtgggcagcaagtgg
ttagttgttggctacgcgcgtttagagcgctgttga
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