Pseudidiomarina andamanensis: D3795_11080
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Entry
D3795_11080 CDS
T10146
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
panm Pseudidiomarina andamanensis
Pathway
panm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
panm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D3795_11080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
panm03019
]
D3795_11080
Messenger RNA biogenesis [BR:
panm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
D3795_11080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QGT96664
UniProt:
A0AA92EUV1
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All DBs
Position
2319616..2320131
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AA seq
171 aa
AA seq
DB search
MIDAEGFRANVGIIICNEQGQVFWARRFGQHSWQFPQGGIDDGETPEQAMYRELWEEVGL
KPEQVEIVYTSRNWFRYRLPKRLVRREQRPTCIGQKQKWFLLRLKCNEKDVNVMQSSHPE
FDDWRWVSYWYPVRQVVSFKREVYRRVLKEFSAVVMNAAPRRPRPPRRRRS
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
gtgatagacgcagaaggatttcgcgccaatgtgggaatcattatctgcaacgagcaggga
caagtcttttgggcgcgtcgattcggtcaacatagctggcaatttccgcaaggcggaatt
gatgatggcgaaacgccagagcaagctatgtaccgtgaactctgggaagaggttgggcta
aagcccgaacaagtcgaaattgtttacaccagtcgcaattggtttcgttaccgattaccg
aagcgtttggtacgacgcgaacaacgaccaacctgtattggtcagaagcagaaatggttt
ttgctgcggttaaaatgtaatgaaaaagatgtgaacgtcatgcagtcgtcacatcctgag
tttgatgactggcgttgggtcagttactggtatcctgtgcgacaagttgtgtcgttcaaa
cgggaagtgtatcgacgggttctgaaagagttctcggcagtcgtgatgaatgctgcgcca
cgtcgcccaagacccccacgccgccgccgttcttaa
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