Pandoraea sp. NE5: PanNE5_00180
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Entry
PanNE5_00180 CDS
T10412
Symbol
hmgCl
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pann Pandoraea sp. NE5
Pathway
pann00280
Valine, leucine and isoleucine degradation
pann00650
Butanoate metabolism
pann00907
Pinene, camphor and geraniol degradation
pann01100
Metabolic pathways
pann01120
Microbial metabolism in diverse environments
pann04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PanNE5_00180 (hmgCl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PanNE5_00180 (hmgCl)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PanNE5_00180 (hmgCl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PanNE5_00180 (hmgCl)
Enzymes [BR:
pann01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
PanNE5_00180 (hmgCl)
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
BDD90578
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Position
19214..20170
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AA seq
318 aa
AA seq
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MRETQHAIVQEVGFRDGLQSICRVMSTEAKKKWIAATYDAGVRHMEVTSFVPPKLLPQLA
DAAEIVDFAIRHPDLTVTALAPNLRGAENALKAGVHRIVAPISVSEKHSLANVRKTPDDM
IDEFRRMRELRDSDPSWSGTRVVAGLSTVFGCTYQGYIPERDVRDIVDKVIQAGADAIAL
GDTTGHATPTHVRRLLETLLPRAEDKVRSLHLHDTRGLALANAVVALDHGIREFDASLAG
LGGCPHAPGATGNVATEDLVYMLHSMGFETGIDIEAMLRARDVLAEHLPGEPLYGYISRS
GVLRDSLPVFNSSRGLQQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcgggagacccaacacgctattgttcaggaagtcggattcagagatggtctacagagc
atctgtcgcgtcatgagcacagaggccaagaaaaagtggatcgccgcgacatatgacgcc
ggtgtgcgacacatggaagttacgtccttcgtgccgcccaaactacttcctcaactggca
gacgccgctgaaatcgtcgatttcgccattcgacatccagacctcactgtcacagctctt
gcgcctaaccttcgaggcgcagaaaacgcactgaaagcgggagttcatcgcatcgtcgct
ccgatttcggtcagcgagaagcatagcctggcgaatgtccgcaaaacgccggacgatatg
atcgacgagtttcggaggatgcgcgaacttcgcgacagcgatccgtcctggtccggcacg
cgagtcgtcgcgggtctgtccactgtcttcgggtgcacgtatcaaggctatatccccgag
agagacgtgcgcgacatcgtcgacaaagtcatccaggccggcgccgacgcaattgcactc
ggcgacaccacaggccacgccacgccgactcacgttcgccgattgttggagacgctcctc
ccgcgcgcggaggacaaggtgcgcagccttcaccttcatgacacccgagggttagcactg
gccaacgccgttgtcgcgctagaccacggcatccgagaattcgacgcctcactcgccgga
ctgggtggctgtccacacgcgcccggcgccactggcaacgtcgcgaccgaagacctcgtg
tacatgctccatagcatgggctttgagaccggcatcgacatcgaagcgatgctccgggcg
cgcgacgttctcgctgaacaccttcctggagaacccctgtatggctatatttcccgctct
ggtgtgcttcgtgactccttacccgtattcaatagttcacgagggctccaacaatga
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