Pandoraea sp. NE5: PanNE5_02210
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Entry
PanNE5_02210 CDS
T10412
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
pann Pandoraea sp. NE5
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pann02000
]
PanNE5_02210
Transporters [BR:
pann02000
]
Other transporters
Pores ion channels [TC:
1
]
PanNE5_02210
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BDD90781
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Position
complement(267788..269611)
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AA seq
607 aa
AA seq
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MPAVLAANPPDNPATDSPTAVQLKATVVTASRTEQTLTDTLAATSVITREDIERSQTQDL
PTLLRGQAGVEIVQNGGFGTSASVFMRGAASNAALVLIDGVPVNAATTGTTNIAQIPVSQ
IDHIEIVRGNVSALYGSQAVGGVIQIFTRKGNGGPPRAYAEVGYGTNNTTQANAGIAGAF
DDGKTRFSLDVSRFHTNGISAQDPRFAPKVNPNRNGDDNTSVSASLSRKVGDTWEVGARL
FQSDGSSSYDNAYGKPTDLNDSDARVRQISGYAKGNLTDKWKTRITVTQGDDYSYNYLNG
SGNGNFHTSSNQIDWANEYAFMPDQKLIAGYTRLEQTVESSTNYDRNNRHLDSGYVGYEG
RFGKHQIQANVRRDVYSDFGGANSYWAGYGYSLTPQWKVMANASDGFRAPTFNELFYPGF
GNPNLQPERSISKELAVQFNGGERLGLVKLTGFRTDYTNLIQSLTVFPYTAANVANARVE
GLELTYAGRPFLGMDVRASFTRQNPTDLDADRQLARRARQFGSVGLSKTFGKFTVGGDVF
YSGERYDTGGQHLGAYTLVNLQTRYDIDKSWYVSAHLDNVFNKNYQTVYGYNTLGRAIYV
SLGWKQF
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtgccggcagtgctcgccgccaatccgcccgacaaccccgcgaccgacagccccaccgcc
gtgcaactcaaggcgaccgtggtgacagcctcgcgcaccgagcagacgctcacagacacg
ctggcggccacctcggtcatcacgcgcgaagacattgaacgcagccagacgcaggacttg
ccgacactgctgcgcggacaggctggcgtggaaatcgtgcagaacggcggtttcggcacg
tcggccagcgtcttcatgcgcggcgcggcatcgaacgctgcgctcgtgctcatcgacggg
gtgcccgtcaacgcagccacgaccggtacgaccaacatcgctcagatcccggtgtcgcag
atcgaccacatcgagatcgtgcgcggcaacgtctcggccctgtatggttcgcaggccgtc
ggtggcgtgatccagatcttcacgcgcaagggcaacggcggcccgccccgcgcctatgcc
gaagtgggctacggcacgaacaacaccacgcaggccaacgccggcattgccggcgcgttc
gacgacggcaagacccgcttctccctggacgtctcgcggtttcacaccaacggcatctcg
gcgcaggacccgcgcttcgcgccgaaggtcaaccccaaccgcaacggcgacgacaacacg
agcgtgagcgcatcgctgtcgcgcaaggtcggcgacacgtgggaggtcggtgcgcgtctg
tttcagagcgacggcagcagcagctacgacaatgcctacggcaagcccaccgacctgaac
gacagcgacgcccgcgttcgccagatctctggttacgcgaagggcaacctcacggacaag
tggaagacccggattaccgtcacgcagggcgacgactacagctataactatctgaacggc
agcggtaacggcaacttccatacgtcgagcaaccagatcgactgggccaacgaatatgcg
ttcatgccggatcagaagctgatcgccggctacacgcgtctggagcaaacggtcgagagc
agtacgaactacgaccgcaacaaccgccatctcgattcgggctacgtcggatatgaggga
cgattcggcaagcatcagattcaggccaacgtgcgacgcgacgtgtattccgatttcggc
ggcgcgaacagctactgggccggctacggctactcgctcacgccgcagtggaaggtcatg
gccaatgcgtcggatggctttcgcgcaccgaccttcaacgagctgttctatccggggttc
ggcaatccgaacctgcaaccggaacgctctatttcgaaggaactcgccgtgcagttcaac
ggcggcgagcgcctcggcctggtcaagttgacggggttccggaccgactacaccaacctg
atccagtcgctcacggtgtttccgtacacggctgcgaacgtcgcaaacgcgcgcgtcgag
ggcctggagttgacctacgcgggccgtccgttcctcggcatggacgtgcgcgcgtcgttc
acgcggcagaacccaaccgatctggatgccgacaggcaactggcgcgtcgcgcccggcag
ttcgggtcggtcggtctgtcgaagacgttcggcaaattcaccgtcggcggcgatgtcttc
tacagcggcgagcgttacgatacgggcggtcagcatctcggtgcctacacgctcgtgaac
cttcagacacgctacgatatcgacaaatcctggtacgtctcggcgcacctcgacaacgtc
ttcaacaagaactaccagacggtctatggctacaacaccctcggacgcgcgatttacgtc
tcgctcggctggaagcagttctaa
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