Pandoraea sp. NE5: PanNE5_02380
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Entry
PanNE5_02380 CDS
T10412
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein B
KO
K19804
lipopolysaccharide assembly protein B
Organism
pann Pandoraea sp. NE5
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
PanNE5_02380 (lapB)
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Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_19
TPR_16
TPR_2
Zn_ribbon_LapB
TPR_1
ARM_TT21
TPR_11
TPR_7
TPR_20
HrpB1_HrpK
TPR_9
Motif
Other DBs
NCBI-ProteinID:
BDD90798
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Position
complement(286057..287232)
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AA seq
391 aa
AA seq
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MEFEVWWLLAIPVIFGCGWVAARLDLRSLLSESRNLPASYFRGLNFLLNEQPDKAIDAFI
EVAKLDPETTELHFALGSLFRRRGETERAIRVHQNLLSRHDLPSADHEHALYELGHDFLK
AGLLDRAEEAFGRLHTGAYAKAAQHAKLTIYQIEKEWHKALTEAEALSDLDPAVSYRKEI
AQFHCELAQEALQRKDADAVTQALDAALAVNPANVRAPLLRGDMLLAAGDAEGALRVLRT
IEQQNPVYLGLAAKRLMRAYEALGRAKEGLAVLSDGLRKNPSDDLLEIVYEQSIALEGPE
AALKLMREQMHRAPSAPGMVRLLEAHAATAHGDTQSDLQLMGKLITQRTKSLPRYVCDQC
GFRARLFYWQCPGCNGWETYTPRRVDVPAAS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgaggtctggtggctattggccatccccgtgatttttggctgcggctgggtg
gccgcacgcctggatctgcgcagcttgctctccgagagccgtaatctgccggcgtcctac
tttcgcggtctgaacttcctgctcaacgagcagcccgacaaggcgatcgatgccttcatc
gaagtcgccaagcttgatcccgagaccaccgagctgcacttcgcgctgggtagtctgttc
cgtcgtcgcggcgagacggagcgcgccattcgtgtgcaccagaacctgctctcgcgccat
gacctgccgtcagccgatcatgagcacgcgctctacgaactcggccacgattttctcaag
gcggggttgctagaccgtgccgaagaggcgttcggccgactgcacactggggcttatgcc
aaggcagcgcaacatgcaaagctcacgatctatcagatcgagaaggaatggcataaggcg
ctgaccgaggccgaggcgctgagtgacctcgaccctgccgtgtcgtaccgcaaggagatc
gcgcagttccactgcgagctggcgcaggaagcgctgcaacgcaaggacgccgacgccgtt
acgcaagcgctggacgctgcgctcgcggtcaatcccgccaacgtgcgtgcgccgctgctg
cgcggcgacatgctgctcgctgcgggcgacgccgaaggcgcgttgcgcgtgcttcgcacc
atcgagcagcagaatccggtgtacctcggcctggcggccaagcgcctgatgcgggcgtat
gaggcattgggccgggcgaaagaagggctcgccgtgctgagcgatgggctgcgcaagaat
ccgtcggacgatctgctggagatcgtctacgagcagtcgattgccctcgaaggcccggaa
gcggcgctcaagctcatgcgcgaacagatgcaccgcgcgccgagcgcgcccggcatggtg
cgcctgctcgaagcccatgccgccacggcgcacggcgacacgcagtcggacctgcaactc
atgggcaagctcatcacgcagcgtaccaagtcgttgccccggtatgtctgcgaccagtgc
ggcttccgagcgcgattgttttattggcaatgccccggctgtaacggctgggagacctat
acgccgcgacgtgtcgacgtgccggcggcctcctaa
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