Pandoraea sp. NE5: PanNE5_02410
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Entry
PanNE5_02410 CDS
T10412
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pann Pandoraea sp. NE5
Pathway
pann03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PanNE5_02410 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pann03011
]
PanNE5_02410 (rpsA)
Ribosome [BR:
pann03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
PanNE5_02410 (rpsA)
Bacteria
PanNE5_02410 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
DUF3679
Motif
Other DBs
NCBI-ProteinID:
BDD90801
LinkDB
All DBs
Position
complement(288137..289840)
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AA seq
567 aa
AA seq
DB search
MSDLQTSTNESFAALFEESLSRQDMRAGEVISAEVVRVDHNFVVVNAGLKSEAYIPIEEF
LNDQGEVEVQAGDFVSVAIDALENGYGDTVLSRDKAKRLASWLQLEKALESGELVTGTIT
GKVKGGLTVMVNGIRAFLPGSLVDTRPVKDTTPYEGKTLEFRVIKLDRKRNNVVLSRRAV
IEATQGEERAKLLETLKEGAIVKGVVKNITDYGAFVDLGGIDGLLHITDIAWRRVRHPSE
VLSVGQEVTAKILKFDQEKGRVSLGVKQLGDDPWEGIARRYPQGTRLFGKVTNITDYGAF
VEVESGIEGLVHVSEMDWTNKNVAPTKVVQLGDEVEVMVLEIDEDRRRISLGMKQCKANP
WDDFSRNFKKGDKIKGGIKSITDFGVFIGLPGGIDGLVHLSDLSWSETGEDAVRKYKKGD
EVEAVVLGIDVEKERISLGIKQLEGDPFNSFVAIHDKGSIVDGTIKAVDPKGAVVSLGED
VEGYLRASEISHDRVEDARNVLKEGEAVNAMIVNIDRKSRNINLSIKAKDSAEQQEAISK
MSSDSSAASGTTNLGALLKAKLDSQNQ
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctgcaaacctcgactaacgaatcattcgcggcactcttcgaagagtcgctc
tcccgtcaagacatgcgtgctggtgaagtcatcagcgcagaagtcgttcgggttgaccac
aactttgtggtcgtcaacgccgggctcaagtccgaagcgtacatccctatcgaagaattc
ctgaatgatcagggcgaggtcgaagttcaggccggcgattttgtttccgtggcgatcgac
gccctggaaaacggctacggcgacaccgtgctgtcgcgcgacaaggccaagcgtctggcc
tcgtggctgcaactggaaaaggccctcgaatcgggcgagctcgtgaccggcacgattacc
ggcaaggtcaagggcggcctgaccgtcatggtcaacggcatccgcgcattcctgccgggc
tcgctggtggacacgcgtccggtcaaggacacgaccccgtacgaaggcaagaccctcgaa
ttccgtgtgatcaagctcgatcgcaagcgcaacaacgttgtgctctcgcgtcgtgccgtg
atcgaagccacccagggtgaagagcgcgccaagctgctcgagacgctcaaggaaggcgcg
atcgtcaagggcgtggtcaagaacatcaccgactacggcgcattcgtcgacctcggcggt
atcgacggcctgctgcacatcaccgacatcgcctggcgtcgtgtgcgtcacccgagcgaa
gtgctgtcggttggccaggaagtcaccgccaagatcctcaagttcgatcaagagaagggc
cgtgtctcgctgggcgtcaagcaactcggcgacgatccgtgggaaggcattgctcgccgc
tacccgcaaggcacccgcctgttcggcaaggtcaccaacattaccgactacggcgcattc
gtcgaagtggaatcgggcatcgaaggcctggttcacgtgtcggaaatggactggaccaac
aagaacgttgcaccgaccaaggttgtccagctgggcgacgaagtcgaagtcatggtgctc
gagatcgacgaagaccgtcgtcgtatcagcctgggcatgaagcagtgcaaggcgaacccg
tgggacgacttctcgcgcaacttcaagaagggcgacaagatcaagggcggcatcaagtcg
atcaccgacttcggcgtgttcattggtctgccgggcggcatcgatggcctggttcacctg
tcggacctgtcgtggagcgaaaccggcgaagacgccgtgcgcaagtacaagaagggcgac
gaagtcgaagccgtggttctgggcatcgacgtcgagaaggaacgcatctcgttgggcatc
aagcagctcgaaggcgatccgttcaactcgttcgtggccattcacgacaagggctcgatc
gttgacggtaccatcaaggcggtcgacccgaagggtgccgtcgtgtcgctgggtgaagac
gtcgaaggttacctgcgcgcttcggaaatttcgcacgaccgtgtggaagatgcccgcaac
gtgctcaaggaaggtgaagccgtcaatgcaatgatcgtcaacatcgatcgcaagtcgcgc
aacatcaacctgtcgatcaaggcgaaggattcggctgaacagcaagaagcgatcagcaag
atgtcgtcggatagctcggcagcgagcggcaccacgaatctgggtgccctgctcaaagcc
aagctggacagccagaatcagtaa
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