Pandoraea sp. NE5: PanNE5_05720
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Entry
PanNE5_05720 CDS
T10412
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pann Pandoraea sp. NE5
Pathway
pann03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PanNE5_05720 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pann03400
]
PanNE5_05720 (ruvB)
Enzymes [BR:
pann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PanNE5_05720 (ruvB)
DNA repair and recombination proteins [BR:
pann03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PanNE5_05720 (ruvB)
RecFOR pathway proteins
PanNE5_05720 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
TIP49
AAA_3
nSTAND3
Rad17
AAA_22
AAA_14
RNA_helicase
AAA_18
TsaE
AAA_33
NTPase_1
AAA_17
ABC_tran
AAA_28
Sigma54_activ_2
IstB_IS21
NB-ARC
DUF815
NACHT
AAA_25
AAA_24
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
BDD91132
LinkDB
All DBs
Position
616976..618046
Genome browser
AA seq
356 aa
AA seq
DB search
MIETDKLAAERIIAPTPASPNEEAFERALRPKLLDEYVGQRKVRGQLEIFIEAARKRSEP
LDHVLLFGPPGLGKTTLAHIIAREMGVHLRQTSGPVLERPGDLAALLTNLEANDVLFIDE
IHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNPLRDR
FGIVARLEFYTAEELTGIVRRSAGLLGAAIVDDGAFEIARRARGTPRIANRLLRRVRDYA
EVKADGRITAAVADAALSMLDVDSVGLDVMDRKLLEAVLHKFDGGPVGVDNLAAAIGEER
DTIEDVIEPYLIQQGFLQRTPRGRVATLAAYRHFGLAAPGSAPDSSSLWSPDATGK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaccgacaaactcgccgccgagcgcatcattgcgccgaccccggcctcgcct
aacgaagaagccttcgagcgcgcgctgcgtcccaagctgctcgacgaatatgtcggtcag
cgcaaggtgcgcggccagttggagatcttcatcgaggccgcgcgcaagcgctcggaaccg
ctcgaccacgtgctgctgttcgggccgccgggcctgggcaagacgacgctcgcccacatc
atcgcccgcgaaatgggcgtgcatttgcgccagacgtcggggcccgtgctcgagcgcccg
ggcgacctcgccgcgctgctgaccaatctcgaagccaacgacgtgctgttcatcgacgaa
atccaccggctctcgcccgtcgtcgaggaaatcctgtatccggcgctcgaggattaccag
atcgacattatgatcggtgaaggccctgcggcacgcagcgtcaagctcgatctgcaaccg
ttcacgctcgtgggagcgaccacgcgcgccggcatgctgacgaatccgttgcgcgaccgc
ttcgggatcgtggcgcgtctggagttctacacggccgaagaactgaccggcatcgtgcgc
cgctcggccggcctgctcggcgcggccatcgtcgacgacggtgcttttgagatcgcccgt
cgcgcgcgcggcacgccgcgtatcgccaaccggttgctgcggcgtgtgcgcgactacgcc
gaagtgaaggccgacgggcgcattaccgccgccgtggccgacgccgcgctctcgatgctc
gacgtcgattcggtcggcctcgacgtgatggaccgcaagctgctcgaagccgtgctccac
aagttcgacggcggccccgtgggcgtggacaacctcgccgccgccatcggcgaagagcgc
gacaccatcgaagacgtgatcgagccgtacctgatccagcagggcttcctgcaacgcaca
cctcgcgggcgcgtcgcgacacttgccgcgtatcgtcacttcggactggccgcccctggc
agtgcgccggacagcagctcgctctggtcgcccgacgccaccggcaagtga
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