Pandoraea sp. NE5: PanNE5_08700
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Entry
PanNE5_08700 CDS
T10412
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pann Pandoraea sp. NE5
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pann03021
]
PanNE5_08700 (rpoH)
Transcription machinery [BR:
pann03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PanNE5_08700 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GRIM-19
Motif
Other DBs
NCBI-ProteinID:
BDD91430
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All DBs
Position
936410..937348
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AA seq
312 aa
AA seq
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MSTAATLHPTTPATGTAPTSRALAFAPSALMLPGSLGNIESYIQAVHRIPLLTAEEEQSL
AKRLRENDDLEAARQLVLSHLRLVVSIARNYLGYGLPHADLIQEGNIGLMKAVKRFDPTQ
GVRLVSYAMHWIKAEIHEYVLRNWRTVKVATTKAQRKLFFNLRSQKQGLQAFTPDEIDQV
ARDLNVKREDVVEMETRMSGGDIALEGHSDDSDSASFAPIAYLADSHQEPTAVIAARERD
RLQSDGLQTALGRLDARSRRIIEARWLSVADDGSGGATLHELADEFGVSAERIRQIEVAA
MKKMKGALQASA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
ttgagtactgccgccactttgcatccgacgacgccggccaccggcacggcgccgacttcg
cgagcccttgcgtttgccccgtctgcattgatgctgccgggcagtctgggcaatatcgaa
agctatattcaagccgtccatcgtattccgctgcttaccgccgaggaagagcagtcgctt
gccaagcgtctgcgcgagaacgacgacctcgaagccgcccgtcagctcgtgctctcgcac
ctgcgcctggtggtgtcgatcgcgcgtaactacctcggctacggtctgccgcacgccgac
ctgatccaggaaggcaacatcggcctgatgaaagccgtcaagcgcttcgatccgacccag
ggggtgcgactcgtgtcgtacgccatgcattggatcaaggccgagattcacgagtatgtg
ctgcgcaattggcgcacggtcaaggttgcgacgaccaaggcccagcgcaagctgttcttc
aatctgcgcagccagaagcaaggcctgcaggcgttcacgccggacgagatcgatcaggtc
gcccgcgatctgaacgtcaagcgcgaagacgtcgtcgagatggaaacgcgcatgtcgggc
ggcgatatcgccctcgaagggcatagcgacgacagcgacagcgcaagcttcgcccccatc
gcgtatctggccgactcgcaccaggagccgaccgccgtgatcgccgcacgcgagcgcgac
cgtctgcaaagcgatggcctgcaaacggccctcggccgtctcgacgcacgcagccgccgc
atcatcgaagcgcgctggctgtcggtggccgacgacggcagcggcggcgccacgctgcac
gagctggcagacgaattcggcgtgtctgccgagcgcatccgtcagatcgaagtcgccgca
atgaagaagatgaagggcgcgctgcaagcctcggcgtaa
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