Pandoraea sp. NE5: PanNE5_09220
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Entry
PanNE5_09220 CDS
T10412
Symbol
dctD-1
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pann Pandoraea sp. NE5
Pathway
pann02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PanNE5_09220 (dctD-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pann02022
]
PanNE5_09220 (dctD-1)
Two-component system [BR:
pann02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
PanNE5_09220 (dctD-1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
AAA_2
HTH_50
AAA
HTH_30
HTH_Tnp_ISL3
TIP49
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BDD91482
LinkDB
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Position
complement(985333..986688)
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AA seq
451 aa
AA seq
DB search
MMYKNLQILFVEDDELVRRATLQSLQLAGLDAFGLASAEAARERITPDFAGIVVSDIRLI
GMSGLELLSHLRQHAPEVPVILVTGHGDISMAVQAIRDGAYDFIEKPFAPDRLIESAKRA
LETRKLMLENQALRRELAEQGGRASRIIGRSPAMETLRTLIANVAMTDAPVLINGDTGTG
KELVARSLHELSRRRDAPFVALNCGALPEAIFESEMFGHEVGAFTGAAKRRIGKLEHASG
GTLFLDEIESMPLALQVKLLRVLQEGVLERLGSNQSVRVDCRVVAAAKGDMEALVREGTF
RRDLYYRLNVVTLALPPLRERREDILPLFEHFMLDAAVRYGRPAPVVSDRMRQELMQADW
PGNVRELRNAADRLVLGVASAPEGDSLAPLPLKEQVDRFERAVLQEALEHSKGNVAATAE
ALHVPKATLYEKLKRYGLHTRSQGEGGDSGR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacaagaaccttcagatcttatttgtcgaagacgacgaactcgtgcggcgtgcc
acgctgcagagcctgcaactcgccggactcgacgccttcgggcttgcctcggccgaagcc
gcgcgcgaacgcatcacgccggatttcgccggcatcgtcgtgtcggacattcgcctgatc
ggcatgagcggacttgagctgctctcgcatctgcgtcagcacgcgcccgaggtgcccgtg
atcctcgtgaccggtcacggcgatatttcgatggccgttcaggcgattcgcgacggtgcc
tacgacttcatcgagaagccgtttgcgccggaccgtctgatcgaatcggccaagcgtgcg
ttggaaacgcgcaagctcatgctggagaaccaggcgttgcggcgcgaactggcggaacag
ggcggccgcgcctcgcgcatcatcgggcgcagtccggcaatggagacgctgcgcacgctc
atcgccaacgtggcgatgaccgatgcgccggtgctcatcaacggcgacacggggacgggc
aaggagctggtggcgcgcagtctgcatgaactgtcgcgccgccgcgatgcgccgttcgtc
gcgctgaactgcggcgcgttgcccgaggcgattttcgagagcgagatgttcggtcacgag
gtgggcgcgtttaccggcgcggccaaacgtcgcatcggaaagcttgaacatgcgtcgggc
ggcacgttgtttctcgacgagatcgagagcatgccgcttgcgttgcaggtcaagctgctg
cgcgttttgcaggaaggtgtgctggaacggttgggctcgaatcagtcggtgcgtgtcgac
tgccgcgtggtcgctgctgcgaagggcgatatggaagcgctggtgcgcgagggcacattc
cgtcgcgatctgtattaccggctgaatgtggtgacgctggcgttgccgccgctgcgcgag
cgtcgcgaggatatcctgccgctgttcgagcacttcatgctggacgccgccgtgcgctat
ggacgtccggcgcccgtggtctcggatcggatgcgtcaggagctgatgcaggcagactgg
ccgggcaacgtgcgcgagcttcgcaatgcggcggatcgtctggtgctcggtgtggcgagt
gcgcccgagggcgactcgctcgcgccgctgccgctcaaggagcaggtggaccgcttcgag
cgcgccgtgctgcaagaggcgctggagcacagcaagggcaacgtggcggcgacggccgag
gcgctgcacgtgcccaaggcgacgctgtatgaaaagctcaagcgttacggacttcacacg
cgcagtcagggcgagggcggcgacagcgggcgttga
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