Pandoraea sp. NE5: PanNE5_10510
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Entry
PanNE5_10510 CDS
T10412
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pann Pandoraea sp. NE5
Pathway
pann03420
Nucleotide excision repair
pann03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PanNE5_10510
03430 Mismatch repair
PanNE5_10510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pann03400
]
PanNE5_10510
Enzymes [BR:
pann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PanNE5_10510
DNA repair and recombination proteins [BR:
pann03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PanNE5_10510
MMR (mismatch excision repair)
Other MMR factors
PanNE5_10510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
BDD91611
LinkDB
All DBs
Position
complement(1114537..1116621)
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AA seq
694 aa
AA seq
DB search
MSEQPTAPARDPWAELNDRQREAVDYGVGDDGAPGGPLLVIAGAGSGKTSTLAHRVANLI
VRGADPNRILLLTFSRRAAGEMERRVGAVLQKVLGLASSQPPSLPWAGTFHAIGARILRD
VATRIGLSEAFTIHDRSDAEDLLGLARHDLGFSATQSRFPLKGTCLSIYSRVVNSQAPLA
EVLAKHFPWCAQWEAQLKTLFGAYVDAKQAQHVLDYDDLLLYWAETMSAPDLARELGERF
DHVLVDEYQDTNRLQAQILLAMKPDGRGLTVVGDDAQSIYAFRAATIRNILDFPGQFAEP
AHVVTLERNYRSTQPILDASNAVIAESNERYAKALWTDRQSTHLPQLVNVSDESGQARWV
ADQVLAQRETGTRLMQQAVLFRTGSHSAALELELTRRNIPFVKFGGLKFLEAAHVKDMLS
ILRWAHNPASRLSGFRVAQLIPGIGPVSATRLLDAMSASAMPAQVLADFKPPSAAAADWR
AFVDVFIALHDTRLSWPADVDLALRWYAPLLTQRFDDAAVRQADLEQLARIAGTYGSREQ
FLTELTLDPPDATSAQSGPPLLDEDYLILSTIHSAKGQEWRSVYVLNVVDGCIPSDMSTG
DDEDIEEERRLLYVAMTRAKESLQLVVPQRFYVHQQTGMGDRHVYGTRSRFVSDTMLPLY
EILPKPREGEVLRGPVGDVAVHIDVARKLRNAWS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacagccgaccgcccccgcccgcgatccgtgggccgaactcaacgaccgccag
cgcgaagccgtcgactatggtgtcggtgacgatggcgcgcccggcgggccattgctcgtc
atcgccggcgcgggctcgggcaagaccagcacgcttgcgcatcgcgtcgccaacctcatc
gttcgcggggccgaccccaaccgtatcttgttgctcactttctcgcgtcgcgccgccggc
gaaatggagcgacgcgtgggcgcggtgctgcaaaaggtgctggggctggcgtcgtcgcaa
ccgccgtcgctgccgtgggccggcacgtttcacgccattggcgctcgcattctgcgcgat
gtggcaacgcgcatcggcctgtcggaagcgttcaccattcacgaccgcagcgatgccgaa
gatctgctgggccttgcgcgccatgacctcggcttttccgccacgcagtcgcgcttcccg
ctcaagggcacatgcctctcgatctattcgcgcgtggtgaacagtcaggcaccgcttgcg
gaagtgctcgcgaagcatttcccgtggtgcgcgcaatgggaggcgcagctcaagacgctc
ttcggtgcctacgtcgacgcgaagcaagcgcaacacgttctcgattacgacgatctgctg
ctgtactgggccgagacgatgagcgcgccggatctcgcgcgcgaactgggcgagcgcttc
gaccacgtgctcgtcgacgaataccaggacaccaatcggctgcaggcgcagatcctgctc
gcgatgaagcccgacggacgcggcctcaccgtcgtgggggatgatgcgcagtcgatttat
gcgttccgcgcggccaccatccgaaacatcctcgactttcccgggcaatttgccgagccc
gcccatgtggtcacgctcgagcggaattaccgttcgacgcaaccgattctcgatgcgtcc
aatgccgtgatcgccgagtcgaacgagcgctacgcgaaggcattgtggaccgatcggcaa
tcgacgcatctgccgcaactcgtcaatgtgagcgacgagtcggggcaggcccgctgggtg
gcggatcaggtgctggcgcaacgtgagaccggcacccgattgatgcagcaggcggtgctg
ttccgcactggtagccatagcgcggcgctggagctggaactcacacgccgcaatatcccg
ttcgtgaaattcggcggcttgaagtttctcgaagcggcgcacgtcaaggatatgttgtcg
atcctgcgttgggcgcacaacccggccagccgcttgtcggggtttcgtgtggcccagttg
atccccggaatcgggcccgtgagcgccacccgattgctcgacgccatgtcggcctccgcc
atgcccgcgcaggtgctcgcggacttcaagccaccgtcggcggccgctgccgattggcgc
gcgttcgtcgacgtcttcatcgcgttgcacgacacgcggctgtcatggccggccgatgtc
gatctggcgctgcgctggtatgcgccgctgctgacacaacgcttcgacgacgcggccgtg
cgccaggcggacctcgaacagctcgcccgcattgcgggtacgtatgggtcgcgtgagcag
tttctgaccgagttgacccttgatcctcccgacgccacgagtgcgcaatccggcccgccg
ttgcttgacgaggactacctgattctgtcgacgatccatagtgcgaaagggcaggagtgg
cgctcggtctatgtgctcaacgtcgtcgacggctgcattccgtccgacatgagcacgggc
gacgacgaggacatcgaggaagagcgtcggctcttgtatgtggcgatgacgcgcgcgaag
gaatcgctgcaattggtcgtgcctcagcggttttacgtgcatcagcaaacgggaatgggc
gatcgccacgtgtacggcacgcgcagccgtttcgtctccgacacgatgttgccgctgtac
gaaattctcccgaagccgcgcgagggcgaggtgctgcgggggccggtgggcgacgtggcg
gtgcacatcgacgtcgctcgcaagcttcgcaacgcgtggtcttga
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