KEGG   Pandoraea sp. NE5: PanNE5_11740
Entry
PanNE5_11740      CDS       T10412                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pann  Pandoraea sp. NE5
Pathway
pann00300  Lysine biosynthesis
pann00470  D-Amino acid metabolism
pann01100  Metabolic pathways
pann01110  Biosynthesis of secondary metabolites
pann01120  Microbial metabolism in diverse environments
pann01230  Biosynthesis of amino acids
Module
pann_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pann00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PanNE5_11740 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PanNE5_11740 (dapF)
Enzymes [BR:pann01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PanNE5_11740 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: BDD91734
LinkDB
Position
complement(1245393..1246277)
AA seq 294 aa
MRVGLLHYNSAMKLKFTKMQGAGNDFVVIDGISQSIDFTPDQWRALADRHFGVGADQLLL
VERSTQPGVDFRYRIFNADGGEVEHCGNGARCFVKFVRDTGLTDKRTVRVEVQQGLITLT
MRDDGQVSVDMGAPILTASDVPFDASGLAGRREGDDTLWPLDVAGKTTWISVVSMGNPHA
VQVVENVDTAPVETDGPLIERHARFPRRVNAGFLQVVDKHQARLRVYERGAGETLACGTG
ACAAAVAGIRRGLLAAPVAIETHGGTLTIDWDGASGPVIMTGPATTVFEGTIEI
NT seq 885 nt   +upstreamnt  +downstreamnt
atgcgcgtcggccttctccactacaatagcgccatgaagctcaaattcaccaagatgcag
ggtgccggcaacgacttcgtcgtgatcgacggcatctcgcaatccatcgatttcacgccc
gaccagtggcgggcgctcgccgaccgccatttcggcgtcggcgcagaccagctcctgctc
gtcgaacgctcgacgcagcctggcgttgacttccgctatcgcatcttcaacgccgacggc
ggtgaggtggagcattgtggcaatggggcgcgctgcttcgtcaagttcgtgcgcgacacg
gggttgaccgacaagcgcacggtgcgcgtcgaggtgcagcagggcttgatcacgctcacg
atgcgcgacgacggccaggtcagcgtggacatgggcgcgccgatcctcacggcgtcggat
gtgccgttcgacgccagcgggctggcaggtcgtcgcgagggcgacgacacgctctggccg
ctcgacgtggccggcaagacgacgtggatttccgtggtctcgatgggcaatccgcatgcc
gtgcaggtggtggagaacgtcgataccgcgccggtggaaacggacggcccgctgatcgag
cgtcatgcgcgcttcccgcgccgcgtgaatgcgggcttcctgcaggtggtggacaagcat
caggcgcgtctgcgcgtgtacgagcgcggtgcgggcgagacgctcgcctgcggcaccggc
gcatgcgcggcggcagtggcaggcatccgccgcgggctgctggccgcgcccgtggccatc
gaaacgcacggcggcacgctcaccatcgactgggacggcgcaagcggtcccgtcatcatg
acgggacccgccaccacggtcttcgaagggacgatcgagatctga

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