Pandoraea sp. NE5: PanNE5_12140
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Entry
PanNE5_12140 CDS
T10412
Symbol
topB
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pann Pandoraea sp. NE5
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pann03032
]
PanNE5_12140 (topB)
Enzymes [BR:
pann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PanNE5_12140 (topB)
DNA replication proteins [BR:
pann03032
]
Prokaryotic type
DNA Topoisomerases
PanNE5_12140 (topB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
HypA
Zn_Ribbon_TF
Zn_ribbon_PADR1
PrmA
TFIIA
Cas12f1-like_TNB
Zn_ribbon_PaaD
HC2
Motif
Other DBs
NCBI-ProteinID:
BDD91774
LinkDB
All DBs
Position
1290767..1293493
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AA seq
908 aa
AA seq
DB search
MSLADAPSPLPNVMSKALIIAEKPSVANDIARALGGFTKHDEYFENDDYVVSSAVGHLVE
IGAPEDYEVKRGKWSFANLPVIPPHFDLKPIAKSESRLKVLTRLIKRKDVDVLINACDAG
REGELIFRLIAQHAKAKQPVRRLWLQSMTPQSIRDGFSRLRSDDDMLPLADAARSRAEAD
WLVGINGTRAMTAFNSKGGGFFLTTVGRVQTPTLSIVVEREEKIRKFVSRDYWEVRADFV
AASGFYEGRWFDPSFKRNEFDPEQRDSRLWSVAAAESVVAAVRGKQGTVTEESKPSTQLS
PLLFDLTSLQREANGRFGFSAKNTLGLAQALYEKHKVLTYPRTDARALPEDYLATVKETM
AVLKESNNYHQFANQILSKDWVKPNKRIFDNSKISDHFAIIPTLQAPKNLSEPEQKLYDL
VVKRFLAVFFPAAEYQVTTRITEVVGHHFKTEGKVLVNAGWLAIYGKEAQGDGKDGKEEQ
PNLVPVAKDEKVGVDKVESVGLQTKPPARYSEATLLSAMEGAGKLVEEGEWREAMAGKGL
GTPATRAAIIEGLLTEKYLVREGRELHPTAKAFQLMTLLRGLGVDELTLPELTGEWEAKL
SQIERGGLKRDEFMHEIAQMTQTIVKRAKEYDSDTIPGDYATLTTPCPHCGSVVKENYRR
FACTSCAFSISKIPGGRQFEIPEVEDLLKNKTIGPLSGFRSKMGRPFSAILKLSPDDEMG
YKLEFDFGQDSGDEDGEAPDFTGQEPVGKCPKCGGNVFEHGMRYVCENAVASPKTCDFTS
GKVILQQEITREQIHKLLTEGKTDLLTSFKSSRTGRTFKAYLAKQKDGTIGFEFEAKAPK
KTAAKAGDAEADGKAAPARKTATKTAAAKAPAKKTAARKTTAKAKPVKKEATSGASDNAA
VEDEDPPF
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttgccgacgccccctcaccattacctaacgtcatgtcaaaagctctgatcatt
gccgagaaaccgtccgtcgcgaatgacatcgcgcgggcgttgggcggctttaccaagcat
gacgagtacttcgagaacgacgactacgtcgtctcgtcggcggttggccacctcgtcgaa
atcggcgcgccggaagactatgaagtcaaacgcggcaagtggagtttcgccaaccttccc
gtgattcctccgcatttcgacctcaagccgatcgccaagagcgagtcgcgtctgaaggtg
ctcacgcggctcatcaagcgcaaggacgtggacgtcctgatcaacgcctgtgacgcggga
cgcgaaggggaactgatttttcgcctgattgcgcaacacgcgaaggcgaagcagccggtc
aggcggctgtggctgcaatcgatgacgccgcagtcgattcgtgacggcttcagtcgcctg
cgcagcgatgacgacatgctgccgctggccgacgccgcgcgcagccgcgccgaagccgac
tggctcgtgggcatcaacggcacgcgtgccatgaccgcgttcaacagcaagggcggtggt
ttcttcctgacgaccgtcggtcgcgtgcagacgccgacgctgtcgatcgtggtcgagcgc
gaagagaagattcgcaagttcgtgtcgcgcgactactgggaagtgcgcgccgatttcgtt
gccgcctcaggcttctacgaaggccgctggttcgatccgagcttcaagcgcaacgaattc
gatccggagcagcgcgattcgcgtctgtggagcgttgcggcggccgagtcggtcgtggcg
gcggtgcgcggcaagcagggcacggtcacggaagaatcgaagccgtcgacgcaactctca
ccgctgctgttcgacctgacgagcttgcagcgcgaggccaacggccgcttcggtttctct
gccaagaacacgctgggtctggcgcaggcgctgtatgaaaagcacaaggtgctgacgtac
ccgcgtaccgacgcgcgcgcgctgccggaagactatctggccaccgtcaaggagacgatg
gccgtgctcaaggagagcaacaactaccaccagttcgccaaccagatcctgagcaaggac
tgggtcaagccgaacaagcggatcttcgacaacagcaagatcagcgatcacttcgccatc
atcccgacgctgcaggcgccgaagaacctctccgagccggaacaaaagctgtacgacctc
gtcgtcaagcgcttcctggcggtgttcttcccggcggccgagtatcaggtgacgacccgg
atcacggaagtggtgggccatcacttcaagaccgaaggcaaggtgctcgtcaacgctggc
tggctggccatttacggcaaggaagcgcagggcgacgggaaagacggcaaggaagagcag
ccgaacctcgtgccggtcgcgaaggacgagaaggttggcgtcgacaaggtcgaatcggtc
ggcctgcaaaccaagcctccggcacggtacagcgaagcgacgctgctctcggcgatggaa
ggcgcgggcaagctcgttgaagagggagagtggcgcgaggcgatggcgggcaagggtctg
gggaccccggccacgcgggcggccatcattgaagggttgctgacggaaaagtatctcgtg
cgcgaaggccgcgagttgcatccgaccgccaaggccttccagttgatgacactgctgcgc
gggctcggcgtcgacgaactcacgctgcccgaactcacgggcgaatgggaagccaagctc
tcgcaaatcgagcgcggcggcctcaagcgtgatgagttcatgcacgagatcgcgcaaatg
acgcagaccatcgtcaagcgcgcgaaggaatacgactcggacacgatcccgggcgactac
gccacgctcaccacgccgtgtccgcattgcggcagcgtggtcaaagagaactatcggcgc
ttcgcgtgcacgagctgcgctttctcgatctcgaagatcccgggcgggcgtcagttcgaa
atcccggaagtcgaggacctgctcaagaacaagaccatcggaccgctgtcgggattccgc
agcaagatgggccgtccgttctcggccattctcaagctctcgcccgacgacgagatgggt
tacaagctcgagttcgacttcggccaggacagcggcgacgaagacggtgaggcccccgat
ttcacgggacaggagccggtcggcaagtgtccgaagtgcggcggaaacgtgtttgagcac
ggtatgcgttatgtctgcgagaacgccgtcgccagcccgaagacttgcgacttcacgtcg
ggcaaggtgattctccagcaggaaatcacgcgcgagcagattcacaagctgctgaccgag
ggcaagacggatctgctgacgagcttcaagtcgtcgcgtacggggcgaacgttcaaggcg
tatctggccaagcagaaggacggcaccatcggcttcgaattcgaagcgaaggcaccgaag
aagacggctgcgaaggctggcgacgccgaggctgacggcaaagccgccccggcgcgcaag
acggcaacgaagaccgcggcggcgaaggcaccggccaagaagacagcggcccggaaaacg
acggccaaagccaagccggtcaagaaggaagccacgtccggcgcgtcggacaacgctgcc
gtcgaggacgaggatccgccgttctaa
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