Pandoraea sp. NE5: PanNE5_12580
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Entry
PanNE5_12580 CDS
T10412
Name
(GenBank) diguanylate cyclase response regulator
KO
K11444
two-component system, chemotaxis family, response regulator WspR [EC:
2.7.7.65
]
Organism
pann Pandoraea sp. NE5
Pathway
pann02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PanNE5_12580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pann02022
]
PanNE5_12580
Enzymes [BR:
pann01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
PanNE5_12580
Two-component system [BR:
pann02022
]
CheA family
WspE-WspRF (chemosensory)
PanNE5_12580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
Response_reg
PAS_4
GRDA
Chlam_vir
Motif
Other DBs
NCBI-ProteinID:
BDD91818
LinkDB
All DBs
Position
complement(1346532..1347575)
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AA seq
347 aa
AA seq
DB search
MTITPRPPKLVAQAAGAESSLNESSAMVLLVDDQAMVGEAIRRALAGEANIDFHYCSSPD
DAQRVAETTRPTVILQDLVMPGTDGLSLVRQYRASPLTRDIPIIVLSTKEESTIKREAFA
AGANDYLVKLPDPIELIARIRYHSRSYMNLLQRDEAYRALRESQQQLLETNLELQRLTHS
DGLTGLANRRYFDEYFSAEWRRALREQRELALLMIDVDNFKIYNDTYGHIAGDDVLRRVA
TTIADAASRPADLAARFGGEEFVIVLPNTTASGAALIAEKVRAQIDAMAIPHIGSANGQH
VTVSIGGASLVPRTHMASTSLIESADLALYRAKQLGKNRVEMQPGAS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgacgataacgccacgcccccccaagctggtcgcgcaagcggcgggcgccgaaagcagc
ctgaacgaatcatcggcgatggtgttgctcgttgatgaccaggcgatggtcggtgaagcg
attcgccgcgcgctcgcgggggaggcgaacatcgacttccactattgttcgagtccggac
gatgcgcaacgcgtggccgaaaccacgcgtccgaccgtcatcctgcaagatctcgtgatg
ccgggaaccgacggtttgtcgctggtgcggcagtatcgtgccagtccgctcacgcgcgac
attccgatcatcgtgctctcgacgaaggaagagtcgaccatcaagcgcgaagcgttcgcg
gcgggcgccaacgactatctggtcaagctgcccgatcccatcgaactgatcgcgcgcatt
cgctatcactcgcgctcgtacatgaacctgctgcagcgcgacgaggcgtaccgcgcgctg
cgcgagagccagcagcagttgctggagacgaatctcgaactgcagcggcttacgcattcc
gatggcctgaccgggctggcaaatcgccgctatttcgacgagtacttcagcgcggaatgg
cgccgcgcgctgcgcgagcaacgcgaactggcgttgctcatgatcgacgtcgacaatttc
aagatctataacgatacgtatggtcacatcgcaggcgacgacgtcctgcgccgcgtcgcc
accacgattgccgatgcggcgtcgcgtccggccgatctcgccgcgcgcttcggcggcgag
gagttcgtgatcgtgctgccgaacacgacggcgagtggcgcggccctgatcgccgagaag
gtgcgcgcgcagatcgatgcgatggcgattccgcacatcggctcggccaacggccagcac
gtcaccgtcagtatcggcggcgcgtcgttggtgccgcgcacccacatggcctcgacctca
ttgatcgaatcggcggatctggcgctctaccgcgccaagcaactgggcaagaatcgcgtg
gagatgcagccgggcgcttcctga
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