Pandoraea sp. NE5: PanNE5_16010
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Entry
PanNE5_16010 CDS
T10412
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pann Pandoraea sp. NE5
Pathway
pann00260
Glycine, serine and threonine metabolism
pann00630
Glyoxylate and dicarboxylate metabolism
pann00670
One carbon pool by folate
pann00785
Lipoic acid metabolism
pann01100
Metabolic pathways
pann01110
Biosynthesis of secondary metabolites
pann01200
Carbon metabolism
Module
pann_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PanNE5_16010 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PanNE5_16010 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PanNE5_16010 (gcvP)
00670 One carbon pool by folate
PanNE5_16010 (gcvP)
Enzymes [BR:
pann01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PanNE5_16010 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
FANC_SAP
Motif
Other DBs
NCBI-ProteinID:
BDD92161
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Position
1751856..1754783
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AA seq
975 aa
AA seq
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MNALTDLQAPRRSLSELEQRDNFSARHIGPDTPEQQAMLAELGYASRAALIDAVVPASIR
RDGARFAQSLGPFAAAQTESQALAQLRALASQNQVFRSFIGQGYANTFTPGVILRNVLEN
PAWYTAYTPYQPEISQGRLEALLNYQQMIIDMTGLAIANASMLDEATAAAEAMTLVKRTG
KSKSNTFFVADDVLPQTIEVVQTRAKPLGFEVQVGPVAAAADVDAFGVLVQYPGVGGDVR
DYRALADAIHAKGGMLIAAADLLSLTLLTPPGEWGADVAVGNSQRFGVPMGFGGPHAAYL
ATRDELKRSMPGRLVGVSVDSQGKPALRLALQTREQHIRREKATSNICTAQALLAIMASM
YAAYHGPQGLRIIAERTHRLTAVLAAGLAALGAAPRNATFFDTLTVPVAGRADAVHTVAA
ARRFNLRREDADTVGISLDETSTRDDVIALWEVVAEGLGKSAVSLDFDAIEATVSNGYPV
ALARQSAYLTHPVFNRYHSEHEMLRYLRSLSDKDLALDRTMIPLGSCTMKLNATSEMLPV
TWPEFGQIHPFAPTEQTVGYRAMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIQA
YHASRGEAHRDICLIPASAHGTNPASAQMAGMQVVVVACDANGNVDLADLQAKAEQHRDR
LAAIMMTYPSTHGVFEAGARQICEIVHANGGQVYVDGANMNAMVGLCAPGEFGGDVSHLN
LHKTFCIPHGGGGPGVGPVAVGAHLAQFLPNQHSTGYSRDANGIGAVSAAPYGSASILPI
SWMYVAMMGAQGLTAATETAILNANYVAKKLAPHYPVLYSGPAGLIAHECILDLRPLKDT
SGITVDDVAKRLMDFGFHAPTMSFPVPGTLMVEPTESESKHELDRFIEAMIAIREEIRAV
EEGRADREDNPLKHAPHTADVVTADEWPHAYARSQAAYPVKSLRERKYWPPVGRADNVYG
DRNLFCACVPMSDYE
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctttgactgacctgcaagcgccgcgccgctcgctctccgagctggagcagcgc
gacaacttctccgcgcgccacatcggcccggacacccccgaacaacaggcgatgctcgcc
gagctgggctacgcgtcgcgtgccgcattgatcgacgccgtggtccccgcgtcgatccgt
cgcgacggcgcgcgcttcgcccagtcgctcggcccgttcgccgccgcgcaaaccgaatcg
caggcgctggcgcaactgcgcgcgctggccagccagaaccaggtgttcaggtcgttcatc
ggtcagggctacgccaacacgttcacgccgggcgtgatcctgcgcaacgtgctggaaaat
ccggcctggtacacggcctatacgccgtatcagccggaaatctcgcaaggccgtctcgaa
gcgctgctcaactatcagcagatgatcatcgacatgacggggctggcgatcgccaacgcg
tcgatgctcgacgaagcgactgccgccgccgaggcgatgacgctggtcaagcgtaccggc
aagtcgaagtcgaacacgttcttcgtcgccgatgacgtgttgccgcaaaccatcgaagtc
gtgcaaacgcgcgccaagccgctgggcttcgaagtgcaggtcggcccggtggccgccgcg
gccgatgtcgatgcgttcggcgtgctcgtgcaataccccggcgtgggcggcgacgtgcgc
gactatcgcgcgctggccgacgcgatccacgccaagggcggcatgctgatcgccgccgcc
gatctgctctcgctcacgctgctcacgccgccgggcgagtggggcgctgacgtcgccgtt
ggcaacagccagcgctttggcgtgccgatgggctttggtggcccgcacgccgcctacctg
gccacgcgcgacgaactcaagcgctcgatgccgggccgtctggtcggcgtgtcggtcgat
tcgcaaggcaagccggcgctgcgtctggcgctgcaaacgcgcgaacaacacatccgccgc
gagaaggcgacatcgaatatctgtactgcgcaggcgctgctcgccatcatggccagcatg
tacgcggcgtaccacggcccgcaggggctgcgcatcatcgccgagcgcacgcatcgtctg
acggccgtgctggccgccggcctcgccgcactgggcgccgcgccgcgcaacgccacgttc
ttcgacacgctgaccgtgcccgtggccggccgtgccgatgccgtgcacacggtggccgct
gcacgccgcttcaatctgcgtcgcgaagacgccgacactgtcggtatctcgctcgacgag
acgagcacgcgcgacgacgtgatcgccctgtgggaagtggtggccgagggcctcggcaag
agcgccgtctcgctggacttcgacgccatcgaggccaccgtctcgaacggctacccggtg
gcactggcgcgccaaagcgcgtatctcacgcacccagtgttcaaccgctaccactccgaa
catgaaatgctgcgctatctgcgcagcctgtccgacaaggatctggcgctcgaccgcacg
atgatcccgctgggctcgtgcacgatgaagctcaacgccacctcggaaatgctgccggtg
acgtggcccgaattcggtcagattcacccgttcgcgccgacggaacaaacggtcggctac
cgcgcgatgatcgaccagctcgaacagatgttggtggccgcgactggctacgccgccgtc
tcgctgcagccgaacgctggctcgcagggcgagtacgccggtttgctcatcattcaggcg
tatcacgcatcgcgcggtgaagcgcatcgcgacatctgcctgattcccgcgtcggcgcac
ggcacgaacccggcgtcggcccagatggccggcatgcaggtcgtggtggtcgcttgcgac
gccaacggcaacgtcgatctggccgatctgcaggcgaaggccgagcagcatcgcgaccgt
cttgccgcgatcatgatgacgtacccgtccacgcacggcgtgttcgaagccggcgcgcgc
cagatctgcgagatcgtgcatgcgaacggcggtcaggtgtatgtcgacggcgcgaacatg
aacgccatggtcggcctgtgcgcaccgggcgaatttggcggcgacgtttcgcacttgaac
ctgcacaagacgttctgcattccgcacggcggcggcggcccgggcgtgggtccggtcgcg
gtgggcgcgcatctggcgcagttcctgccgaaccagcactcgacgggctactcgcgcgac
gccaacggcatcggtgccgtgtcggccgcgccgtatggttccgcctcgattctgccgatc
tcgtggatgtacgttgccatgatgggcgcgcagggcctgacggccgccaccgagacggct
atcctgaacgcgaactacgtcgcgaagaagctcgcgccgcactacccggtgctgtacagc
ggcccggccgggctgatcgcgcacgagtgcattctggatctgcgtccgctcaaggacacc
agcggcatcacggttgacgacgtggcgaagcgcctgatggacttcggcttccacgccccg
acgatgagcttcccggtgccgggtacgctgatggtcgagccgacggaatcggaatcgaag
cacgaactcgaccgcttcatcgaggcgatgatcgcgattcgcgaggaaatccgtgccgtg
gaagagggccgtgccgatcgcgaggacaacccgctcaagcacgcgccgcacacggcggac
gtggtgacggcggacgaatggccgcacgcctacgcccgcagtcaggcggcgtacccggtg
aagtcgctgcgcgagcgcaagtactggccgccggtcggacgtgctgataacgtctacggc
gaccggaatctgttctgcgcctgcgtgccgatgagcgactacgaataa
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