Pandoraea sp. NE5: PanNE5_16100
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Entry
PanNE5_16100 CDS
T10412
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pann Pandoraea sp. NE5
Pathway
pann03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PanNE5_16100 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pann03400
]
PanNE5_16100 (priA)
Enzymes [BR:
pann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PanNE5_16100 (priA)
DNA repair and recombination proteins [BR:
pann03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PanNE5_16100 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_16
zf-CHY
ADDB_N
HypA
AAA_22
DUF5817
Motif
Other DBs
NCBI-ProteinID:
BDD92170
LinkDB
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Position
complement(1769400..1771907)
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AA seq
835 aa
AA seq
DB search
MTCADDLPAPSLASTADALPPVAQPRLGAPAIARVALDTPLLTLFDYRLDQAASPGQLVQ
VPFGRRQVVGVVWELTHRSEIAPGKLRDVTAVWHELPPLGEDWRELMQFASRYYQRGIGE
VALPGVPAHLRTPMRWPRLLAQRGVQRYRLADGALAALLENVPARLRAQRRLAEGLAQAG
TLDADEARALCAKAADVLKQWAAAGWVVVDTVPFHEAVRHADEADDEDGESSAADANAPT
DCALADALANIDLGTQDTPRATRTLTVGQADAVAAIHDALEVAGAQRLDATAPLGKLDAG
NAGDTGDLPACPPFLLYGVTGSGKTEVYLRAVAEALRERDAQVLVLVPEINLTPQLEGVF
RARFPGETLVTLHSGLAEGERARHWLAAHRGEARIVLGTRLAVMASLPHLRLIVVDEEHD
PSYKQQEGLRYSARDLAIWRANRLRIPVVLGSATPSLDSWRRAEQGRYVRLAMPERATPD
AVLPRVSLIDMDIERKLQRTVHEGLSQSLLAAIRARLEAGEQSLLFLNRRGYAPVLNCDA
CGWISDCRRCSAHMVLHKPERRLRCHHCGAESRIPHACPDCGNLDLAPLGRGTQRIEEAL
AEQFPDARLARIDADSTRRKGSAQALFAQVHAGEVDILIGTQMVAKGHDFRNVTLVGVVN
ADSALFSHDFRAAERLFAQLMQVAGRAGRAARADGPGDVLIQTRYASHPLFASLMRHDYA
GFAAQQLEERRVALLPPFTHQALLRAEARRLDDAMTFLKQAREIAATPALHDARISLWDP
VPMTMVRIAGTERAQLVVESPHRGALQRFLTHWMSELRALKAPVRWHLEVDPLEI
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
ttgacctgcgccgacgacctgcccgccccgtctcttgcatcgactgcggatgccctgccc
ccggtcgcccagccgcgcctcggtgcgcccgctatcgcccgcgtggcgctcgatacgccc
ctgctcacgctgttcgactatcggctcgaccaggccgcgagccctgggcaactggtgcag
gtaccgttcggacgccgacaggtcgtaggcgtcgtctgggaattgacgcaccgcagcgaa
atcgcaccgggcaagctgcgtgacgtcaccgccgtctggcatgaattaccgccgctcggc
gaggattggcgtgagctgatgcagttcgcctcgcgctattaccaacgcggtatcggtgag
gtggccctgccgggcgtcccggcgcatctgcgcacgccgatgcgctggccgcggctactc
gcccagcgtggcgtgcaacgttaccggctggccgacggcgccctggccgcgctcctggag
aacgtgcccgcccggctgcgcgcccagcgccgtttggccgagggtctggcgcaagccggc
acgctcgatgcggacgaggcgcgcgccctgtgcgcaaaggccgccgacgtgctcaaacag
tgggccgccgccggctgggtcgtcgtcgacaccgtgccgttccacgaagcggtacgccat
gccgatgaagctgacgatgaggatggcgaatcgagcgccgctgacgccaacgctcccacc
gattgcgcactcgccgacgctttggccaatatcgacctcggcacgcaggacacgccgcgc
gccaccagaacgttgactgtcgggcaagccgacgccgtcgcggccattcacgacgcgctc
gaagtcgccggcgcccaacgcctcgacgccacagcgccattgggcaagctcgacgccggc
aatgcgggcgacacgggggacctccccgcctgcccccccttcctgctctatggcgtgacc
ggcagcggcaagacagaagtctatttgcgcgccgtggccgaggcgcttcgcgagcgcgac
gcccaggtcctcgtgctcgtgccggaaatcaatctgacgccccaactcgaaggcgtcttc
cgtgcgcgattccccggcgagacgctcgtcacactgcacagcggactggccgaaggcgag
cgagcccggcactggctggccgcccatcgcggcgaggcgcgcatcgtgctcggcacccga
ctcgcggtgatggcgtcgctgccgcacctgcgcctcatcgtcgtcgacgaagagcacgat
ccgtcctacaagcaacaggaagggttgcgctactcggcgcgcgacctcgccatctggcgg
gcgaaccggttgcgcatccccgtcgtcctcggctcggcgacgccgtcgctcgatagctgg
cggcgcgccgagcagggccgctacgtgcgcctcgcgatgcccgagcgcgccacgcccgat
gccgtgttgccgcgcgtctcgctcatcgacatggacatcgagcgcaaacttcagcgcacg
gtgcacgagggcttgtcgcaatcgctgctcgccgccattcgcgcccggctcgaagcgggc
gagcaaagcctgctgttcctgaaccgccgcggttacgccccggtgctcaactgcgatgcc
tgcggctggatcagcgactgccgccggtgcagcgcccacatggtgttgcacaagcccgag
cggcggctgcgctgccatcactgcggcgccgagtcgcgcattccgcatgcctgccccgat
tgcggcaatctcgatctcgcgccgctggggcgcggcacgcagcgcatcgaggaggcgctg
gctgaacagttcccggacgcccggctcgcgcgcatcgatgctgacagcacacgccgcaaa
ggcagcgcgcaggcgctgttcgcgcaggtccatgcgggcgaagtcgacatcctgatcggc
acgcagatggtcgccaagggccacgacttccgtaacgtcacgctcgtgggcgtggtcaac
gccgacagcgccctcttctcccacgacttccgagcggccgagcgtctgtttgcacaactg
atgcaggtggccgggcgcgccgggcgcgccgcccgcgccgacggccccggcgacgtgctg
attcagacgcgctacgcgtcgcacccgttgttcgcgtcgctcatgcgtcacgactacgcg
ggcttcgcggcgcagcaactggaggagcggcgcgtcgccctgctgccgccgttcacgcat
caagcgctcctgcgcgccgaagcccggcgcctggacgacgccatgacgtttctcaaacag
gcccgcgagatcgccgccacgcccgcgctgcacgacgcgcgcatctccctgtgggatccg
gtgccgatgacgatggtccggatcgcgggcaccgaacgcgcccagctcgtggtcgagagc
ccgcatcgcggcgcgctccaacgcttcctcacgcactggatgagcgagctgcgcgcactc
aaggcgcccgtgcgttggcacctcgaagtcgatcctctcgaaatataa
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