Pandoraea sp. NE5: PanNE5_19360
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Entry
PanNE5_19360 CDS
T10412
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pann Pandoraea sp. NE5
Pathway
pann03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PanNE5_19360 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pann03400
]
PanNE5_19360 (ung)
Enzymes [BR:
pann01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PanNE5_19360 (ung)
DNA repair and recombination proteins [BR:
pann03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PanNE5_19360 (ung)
Prokaryotic type
PanNE5_19360 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BDD92496
LinkDB
All DBs
Position
complement(2128448..2129236)
Genome browser
AA seq
262 aa
AA seq
DB search
MRSASTPVTAIAQSVAASADAAGPLKGRIEDQFAALPHDWQTLVAPFVESEAYAPLCRYV
DAEVAAGKTVYPADIFHALRMTSPSDVKVVILGQDPYHGDDQGIAQAHGLAFSVQRGVRV
PPSLRNIYKEIERDLGIVAPPHGNLDAWAKQGVLLLNTTLTVEAGNAASHAKPFKKGGWQ
ACTDTLLKGLAARQGPLVFLLWGSHAQAKAPLLAGHDHLLLEAPHPSPLSAHRGFLGCGH
FSAANTFLEQHGKTPIDWRLPA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtctgcatcgacgccggtcacagcaatcgcccagtcggttgccgcgagcgctgac
gccgccggcccgctcaaggggcgcatcgaggatcagttcgccgcgttgccccacgactgg
cagacactggtcgcgccgttcgtcgaaagcgaggcgtacgcgccactgtgccgttacgtc
gacgccgaagtcgccgccggcaagacggtctacccagcggacatctttcacgcgctgcgc
atgacctcgccttcggacgtgaaggtcgtgatcctcgggcaggacccctatcacggtgac
gatcaaggcatcgcgcaggcgcacggtctggcgttttccgtgcagcgcggtgtgcgcgtg
ccgccgtcgctgagaaatatctacaaggaaatcgagcgcgatctggggatcgttgcgccg
ccgcacggcaatctcgatgcctgggcgaagcagggtgtgctgttgctcaacacgacgctg
accgtggaagcgggcaacgcggcgagtcacgcgaagccgttcaagaaggggggatggcaa
gcctgcaccgacacgttgctcaaggggctggccgcccggcaagggccgctggtgttcctg
ctgtggggcagccatgcacaggccaaggcgccgctgcttgccggccacgatcatctactg
cttgaagccccccacccctcgccgctttcggcgcatcgcggcttcctgggctgcggccac
ttcagcgccgccaataccttcctcgaacagcacggcaaaacgcccatcgactggcgcctg
ccggcgtaa
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