Pandoraea sp. NE5: PanNE5_20270
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Entry
PanNE5_20270 CDS
T10412
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pann Pandoraea sp. NE5
Brite
Enzymes [BR:
pann01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PanNE5_20270
Transfer RNA biogenesis [BR:
pann03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PanNE5_20270
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NCBI-ProteinID:
BDD92587
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Position
2236955..2239204
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AA seq
749 aa
AA seq
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MSPIAIDGCFMNIFFEESGGFKAGTVLSQQGESYQVELPGGRRSKIKGRDVLLRFESPSP
AELMTQAQAAAQDIDMSFLWECAPAEEFAFPVLAAEYFGEGAGVAQQAGLALALQASPVY
FRRKGRGQYQRAPEEQLQAALAGLARKQQQAELQAVYADQLIAGTLPDALKGKELLLLFR
PDKNTIEWKALDAAAMALGKTHAEVMLACGGISSPRAYHEAAFLYEHFPRGTGFPELGPI
PVPGDDLPLADVQAFSIDDSTTTEIDDALSVQVLPDGLLRVGIHIAAPALGITRGDAIDE
IARARLSTVYAPGEKITMLPDAIVEAYTLAEGGARPALSLYVVVKADTYEIVATETHAER
VPISANLRHNELDAIITAETLADGSGEYPHKEALRLLWPFAQSLYEKRQAARVGYGLRPE
VQNKTDFNFYVEGEQVTIKQRMRGAPLDLIVAEMAILANSRWGRLLAECGVPGIYRAQRA
YGVNRTRMQTSPAPHEGLGVEQYAWSTSPLRRYVDLVNQWQLLACVRHGVTAKLAAPFKP
KDADLYVTVSSFEAAYAAYAEHQSRMERYWCLRWLIQENKSQVQASVLKGDTVRLNDIPL
TLIVLGLGPHARGTQIMLDVLSLDVVTLSISVRVAQVLGASQNGLGEDDDEGAGGAGDGG
GGHDGGDGAEGGDDAGGADDADGANDAEGANDTESDGRDESQGDDDVASALADVTAAASH
TVDVASGTSSLAAALMVAGGRDASPGSAC
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctattgcgatcgatggctgtttcatgaatattttttttgaggaatccggcggc
ttcaaggctggcacggtgttgtcgcagcaaggtgagtcgtaccaggtggagctgcccggt
ggacgccgcagcaagatcaaggggcgcgacgtgctgctgcgtttcgagtcgccgtcgcct
gcggagctgatgacgcaggcgcaggccgccgcacaggacatcgacatgagtttcctgtgg
gaatgcgcgcctgccgaggagttcgcgttcccggtgctcgctgccgagtatttcggcgaa
ggcgccggcgttgcgcagcaggccgggctcgcgctggcgctgcaggcttcgccggtgtac
ttccgccgaaaaggccgcggtcagtaccaacgcgcgccggaggaacaactgcaggccgcg
ctcgcgggactcgcccgcaagcaacagcaggcggaattgcaggccgtgtatgccgatcaa
ctgatcgccggcacgctgcccgacgcgctcaagggcaaggaactgctgttgctgttccgt
cccgacaagaacaccatcgagtggaaggcgctcgacgccgccgccatggcgctgggcaag
acgcacgccgaggtgatgctcgcctgcggcggcatttcgtcgccgcgcgcgtatcacgag
gcggcgttcctctacgaacacttcccgcgcggcaccggcttcccggaactcgggccgatc
ccggtacccggcgacgacttgccgctggccgacgtgcaggcgttctccatcgacgattcg
acgacgaccgagatcgacgacgccctctcggtgcaggtactgcccgatgggctgttgcgt
gtcggcatccacattgcggcgccggcactcggcattacgcggggtgacgccattgatgag
atcgcgcgcgcgcgtctgtcgacggtctatgcgccgggcgaaaagatcacgatgctcccc
gatgcgatagtcgaggcgtacacgcttgccgagggcggcgcgcgtccggcactgtcgctg
tatgtcgtggtcaaggctgacacgtacgaaatcgtggcgacggaaacgcatgccgagcgg
gtgccgatctcggcaaacctgcgtcacaacgaactcgacgcgatcatcacggccgagacg
ctggccgatggcagcggcgagtatccgcacaaggaagcgctgcggctgttgtggccgttc
gcgcagtcgctctacgagaaacgtcaggccgcgcgcgtgggttatggcctgcgtccggaa
gtgcagaacaagaccgacttcaatttctacgtcgaaggcgagcaggtcacgatcaagcag
cgtatgcgcggcgcgccgctggacctgatcgtcgccgagatggcgattctcgcgaacagc
cggtggggacgcctgctggccgagtgcggcgtgcccggcatctaccgcgcgcagcgtgct
tacggcgtgaatcgcacgcgcatgcagacatcgccggcgccgcacgaaggtctgggtgtc
gagcaatacgcatggagcacctcgccgctgcgtcgctatgtggatctggtcaaccagtgg
cagttgcttgcgtgcgtgcgtcacggcgtgacggccaagctggcggcacccttcaagccc
aaggatgccgacctgtacgtgaccgtgtcgagcttcgaagccgcctatgcggcttatgcc
gagcaccagagccggatggagcgctactggtgcctgcgctggttgattcaggagaacaag
tcgcaggtccaggcgagcgtgctcaagggcgacaccgtgcgcctgaacgatattccgctg
acgctgatcgttctggggcttggcccgcacgcgcgcggtacgcagatcatgctcgacgtg
ctctcgctcgatgtcgtcacgctcagcatctcggtacgtgtcgcgcaggtgttgggcgcc
agccagaacggactgggcgaagacgatgacgaaggcgccggcggtgcaggagacggcggt
ggggggcacgatggaggcgatggggccgaaggtggcgacgacgcgggaggggccgacgat
gccgatggcgccaacgatgcggagggggcgaacgataccgaaagcgacggccgcgacgaa
agccagggtgacgacgacgtcgcctcggccttggccgacgtcaccgccgcggcgtcgcac
accgttgatgttgcgtccggcacttcgtcgcttgctgccgcgctgatggtggcggggggg
cgcgacgcgtctcccggttcggcgtgctga
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