Pandoraea sp. NE5: PanNE5_22380
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Entry
PanNE5_22380 CDS
T10412
Name
(GenBank) hypothetical protein
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
pann Pandoraea sp. NE5
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pann03009
]
PanNE5_22380
Enzymes [BR:
pann01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
PanNE5_22380
Ribosome biogenesis [BR:
pann03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PanNE5_22380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
BDD92798
LinkDB
All DBs
Position
complement(2473887..2474603)
Genome browser
AA seq
238 aa
AA seq
DB search
MSGTLYLIPNTLGTNTRGGLPAVLPEDVRNVTAGLTYFVGEQAKSTRAFLKLVGVSTPIQ
EIDIRELNVNTPAAAIDALLAPMLAGADGGLVSEAGCPAVADPGALLVRRAHEKGVRVVP
FVGPSSILLALMASGLNGQSFAFHGYLPTDAADRAKRLRELEQRSRKEKQTQIFIETPYR
NKAMLDALLQTCDASTLLCVAVDVTQDGEQIVTHRIQGWPQARIDLHKRPAIFLFLGQ
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacgctgtatctgatcccgaatacgcttggcacgaacacccgcggcggcctg
ccggcggtactgcctgaagacgtccgcaacgtgacggccggtctgacgtattttgtcggc
gaacaggccaagagcacgcgagcattcctcaaattggtcggggtgtccacgccgattcag
gaaatcgacattcgcgagttgaacgtcaacacgccggcagcggccatcgatgcgctcctc
gcgccgatgcttgccggtgccgatggcggcctcgtctcggaggccggctgcccggccgtg
gcggacccgggtgcgctgctggtgcgaagggcgcacgagaaaggggtgcgcgtggtgccg
ttcgtcggcccgagttcgatcctgctcgccttgatggccagcggactgaacgggcagagt
ttcgccttccacggctacctgccgacggacgcggccgatcgagcgaagcgcttgcgcgaa
ctcgaacaacgctcgcgcaaggagaagcagacgcaaatcttcatcgagacgccctatcgc
aacaaggccatgctcgatgcgctactgcagacctgcgacgcctccaccctgctgtgcgtc
gcggtcgacgtcacgcaggacggcgagcagattgtcacgcatcggatccagggatggcct
caggcgcgtatcgatctgcacaagcgccccgccattttcctatttctgggccagtaa
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integrated database retrieval system
