Pandoraea sp. NE5: PanNE5_22790
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Entry
PanNE5_22790 CDS
T10412
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pann Pandoraea sp. NE5
Pathway
pann02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PanNE5_22790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pann02000
]
PanNE5_22790
Transporters [BR:
pann02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PanNE5_22790
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
BDD92839
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Position
2514589..2515764
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AA seq
391 aa
AA seq
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MTFSRRGFWQRTLGALACATVLGSIASTATAAPVALNIVDVAGNLALTQKGFEAFRDKYP
DLVSKITFTNAPAPQLPGKIKAMQAAGRSDIDIVLTGTDALAAGIQQNLWQRLLPDDSAK
LPGVLDKYSPNVRAMQELSKGYGITVTYSPGGPLIEYNPAKVSHPPKTAAELLSWCKANP
GKLIYARPANSGPGRAFLMGLPYLLGDKDPHDPIKGWDKTWAFLKELDSCIPYYPGGTSA
VMKELGEGSRDMTVTMTGWDINPRALGIVPASFKVQAFDKFTWVNDAHYIVVPKGVAKEK
MEVILKLINFMLEPAQQALAYDDGYFYPGPAVKDVPLSAAPAKSQEVIAKYGRAEYAKLI
ADFPHAVPLDATAMVAAFQKWDAEIGARKSK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcagccgcagaggattctggcaacgcacgcttggcgcactggcatgtgcgacc
gtattgggaagcatcgcgagtaccgcaaccgctgcgccggtcgcgctgaacattgtcgac
gtggcgggtaacctcgccctcacgcagaagggcttcgaggccttccgcgacaagtacccg
gatcttgtttccaagatcacgtttaccaacgcgcccgctccacaactgccgggcaagatc
aaggccatgcaagcggcgggtcgttccgacatcgacatcgtgctcacgggtaccgatgcg
cttgccgccggtattcagcaaaacctctggcagcgtctgctgcctgatgacagcgcaaag
ctgccgggcgtactcgacaagtactcgcctaacgtgcgcgcgatgcaggaactctcaaag
ggctacggtattaccgtgacgtatagcccgggaggaccgctcattgaatacaacccggcc
aaggtcagtcatccgccgaagacagccgccgagctgctctcgtggtgcaaggccaatccg
ggaaagctgatttatgcacgtccggccaactcgggcccgggccgcgcattcctcatgggg
ttgccgtatctgctgggcgacaaggacccgcacgatccgatcaagggctgggacaagacg
tgggcgttcctgaaggaactcgactcgtgcattccctattacccgggcggcacgtcggcg
gtgatgaaggaactgggtgagggcagtcgcgacatgaccgtgaccatgacgggttgggac
atcaacccgcgtgccttgggcatcgtgccggcaagtttcaaggtgcaggccttcgacaag
ttcacgtgggtcaatgatgcgcattacatcgtcgtgcccaagggcgttgccaaagagaag
atggaagtcattctcaagctgatcaacttcatgctcgagcctgcgcaacaggcgctcgcc
tacgacgacggctacttctacccgggccccgccgtgaaggatgtgccgctgtccgccgcg
ccggcgaagagccaggaagtgattgcgaagtatggccgtgcggaatacgcgaagctcatc
gccgacttcccgcatgccgtgccgctcgatgcgaccgcaatggtcgccgcattccagaaa
tgggatgccgagatcggcgcgcgcaaatcgaagtga
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