Pandoraea sp. NE5: PanNE5_24800
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Entry
PanNE5_24800 CDS
T10412
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pann Pandoraea sp. NE5
Pathway
pann00730
Thiamine metabolism
pann01100
Metabolic pathways
pann01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PanNE5_24800 (thiC)
Enzymes [BR:
pann01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PanNE5_24800 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BDD93040
LinkDB
All DBs
Position
complement(2745583..2747499)
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AA seq
638 aa
AA seq
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MNANPKFLSANARVDEAAIAPLPNSRKIYVEGSRPDLRVPMREISQADTPTSFGGEKNPP
IFVYDTSGPYTDPDAQIDIRSGLPALRAAWIEERGDTEALPGMTSAYGRERAADDATAEL
RFPGLHRTPRRAKAGKNVTQMHYARQGIITPEMEYIAIRENLRRQEYIESVRNAGPQGER
LAKLLSRQHPGQHFGASLPAEITPEFVRSEIARGRAIIPNNINHPESEPMIIGRNFLVKI
NANIGNSAVTSSIGEEVDKMTWAIRWGGDTVMDLSTGKHIHETREWILRNSPVPIGTVPI
YQALEKVNGKAEDLTWEMFRDTLIEQAEQGVDYFTIHAGVRLAYVPMTANRMTGIVSRGG
SIMAKWCLAHHKESFLYTHFEEICEIMKAYDVAFSLGDGLRPGSIYDANDEAQLSELKTL
GELTQIAWKHDVQVMIEGPGHVPMQLIKENMDLQLEYCDEAPFYTLGPLTTDIAPGYDHI
TSGIGAATIGWYGTAMLCYVTPKEHLGLPNKDDVKEGIITYKLAAHAADLAKGHPGAQIR
DNALSKARFEFRWEDQFNLGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQD
VRDYAAKQGISDEAALKQGMEVKAVEFVKNGAEIYRRT
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaatccgaagttcctctcagccaatgcgcgcgtggatgaagccgcgatcgca
ccgctgccgaattcccgcaagatctacgtcgaaggctcgcgccccgacctccgtgtcccg
atgcgcgaaatctcgcaagccgacacgccgacaagctttggcggtgaaaagaatccgccg
atcttcgtatacgacacctccggtccgtacaccgatccggacgcccagatcgacatccgc
tccggcctgcccgccctgcgcgcggcatggatcgaggagcgcggcgacaccgaagcgctg
ccgggcatgacgtccgcctacggccgcgagcgcgccgccgacgacgccaccgccgagctg
cgtttcccgggcctgcatcgcacgcctcgccgcgccaaggccggcaagaacgtgacgcag
atgcactacgcgcgtcagggcatcatcacgcccgagatggaatacatcgccattcgcgaa
aacctgcgccgtcaggaatacatcgagagcgtgcgcaacgccggcccgcagggcgagcgt
ctggccaagctgctctcgcgccagcatccgggtcagcatttcggcgcgagcctccccgcc
gaaatcacgccggaattcgtgcgcagcgaaatcgcacgcggtcgcgccatcatcccgaac
aacatcaaccacccggaatcggagccgatgatcatcggccgcaacttcctcgtcaagatc
aacgcgaacatcggcaactcggccgtgacctcgtcgatcggcgaggaagtggacaagatg
acgtgggcgatccgctggggcggcgacacggtgatggatctgtcgaccggcaagcacatc
cacgagacgcgtgaatggatcctgcgcaacagcccggtacccatcggcacggtgccgatc
tatcaggcgctcgagaaggtgaatggcaaggccgaagacctgacgtgggaaatgttccgc
gacacgctcatcgagcaggccgagcaaggcgtcgactacttcacgattcacgccggcgtg
cgcctcgcgtacgtaccgatgaccgccaaccgcatgactggcatcgtgagccgcggcggc
tcgatcatggccaagtggtgcctcgcgcaccataaggaaagcttcctgtacacgcacttc
gaagagatctgcgaaatcatgaaggcctatgacgtcgcgttctcgctgggcgacggcctg
cgtccgggctcgatctatgacgccaacgacgaagcacaactctcggagctgaagacgctg
ggtgagttgacacagatcgcgtggaagcacgacgtgcaggtgatgatcgaaggcccgggc
cacgtgccgatgcagctcatcaaggagaacatggatctccagctcgagtactgcgacgaa
gccccgttctacacgctcggaccgctgacgacggacatcgcccccggctacgaccacatt
acgtcgggcatcggggcggcgaccatcggctggtacggcaccgccatgctgtgctacgtc
acgccgaaggaacacctcggtttgccgaacaaggacgacgtgaaggaaggcatcatcacg
tacaagctcgccgcgcacgccgccgatctcgccaagggccaccccggcgcgcagattcgc
gacaatgcgttgtcgaaggcgcgtttcgagttccgttgggaagaccagttcaatctgggt
ctcgatccggacaaggcgcgcgaattccacgacgaaacgctgccgaaggactccgccaag
gttgcccacttctgctcgatgtgcggaccgcacttctgctcgatgaagatcacgcaggac
gtgcgcgattacgccgccaagcaaggcatttccgacgaagcggcgctcaagcagggcatg
gaagtcaaggccgtggagttcgtcaagaacggcgccgagatctatcgtcgtacctga
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