Pandoraea sp. NE5: PanNE5_25540
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Entry
PanNE5_25540 CDS
T10412
Symbol
benD
Name
(GenBank) 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
KO
K05783
dihydroxycyclohexadiene carboxylate dehydrogenase [EC:
1.3.1.25
1.3.1.-]
Organism
pann Pandoraea sp. NE5
Pathway
pann00362
Benzoate degradation
pann00364
Fluorobenzoate degradation
pann00622
Xylene degradation
pann01100
Metabolic pathways
pann01120
Microbial metabolism in diverse environments
pann01220
Degradation of aromatic compounds
Module
pann_M00551
Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PanNE5_25540 (benD)
00364 Fluorobenzoate degradation
PanNE5_25540 (benD)
00622 Xylene degradation
PanNE5_25540 (benD)
Enzymes [BR:
pann01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.1 With NAD+ or NADP+ as acceptor
1.3.1.25 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
PanNE5_25540 (benD)
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Motif
Pfam:
adh_short
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
BDD93114
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Position
2826817..2827590
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AA seq
257 aa
AA seq
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MTTQRFAGKVMVVTGAAQGIGRGVALRASAEGARVVFVDRAEFVAEVAAEAVGESAGFVA
DLETYEGAAAAMAFANERFGGIDILINGVGGAIRMRPFAEFEPAQIDAEIRRSLMPTLYT
CHAVLPYLLKRGGGTIVNVSSNATRGIRRVPYSAAKGGVNAITQSLAMEYAEHNIRVAAT
APGGTTAPPRRIPRNAAGDSEQEIAWMNEAVAQVTESTFFKRYGTLDEQVAPILFLASDE
AGYITGTVLPVAGGDTG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcaacgatttgccggcaaggtcatggtcgtgaccggtgcggcgcaaggcatc
ggtcggggtgtcgcgctgcgcgcgtcggccgaaggggcgagggtggtcttcgtggatcgt
gccgaattcgtcgccgaggtcgcggccgaagcggtcggcgagtcggccggcttcgtggcc
gatctcgagacctacgaaggtgccgccgcagccatggcgttcgccaacgagcgcttcggg
ggcatcgacattttgatcaacggcgtgggcggggcgattcgtatgcgtccgttcgccgag
ttcgagccggcgcagatcgacgcggagattcgccgctcgctgatgccaacgctctatacc
tgccacgcggtgctgccgtacctgctaaagcgtggtggcggcacgatcgtcaacgtctcg
tcgaatgcgactcggggtattcgacgcgtgccttactccgcagcgaagggcggggtgaac
gccatcacgcaatcgctggcgatggaatacgccgagcacaatattcgcgtcgcggcgact
gcgccgggaggcaccacggcgccgccccgccggattccacgtaacgccgcgggcgacagc
gaacaagagatcgcctggatgaacgaggcggtcgcgcaggtgaccgaatcgacgttcttc
aaacgttacggcaccctcgacgagcaagtcgcgcccattcttttcctggcctccgacgaa
gcgggatacatcaccggtacggtcttgccggtcgccggcggcgatacgggctga
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