Pandoraea sp. NE5: PanNE5_27580
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Entry
PanNE5_27580 CDS
T10412
Name
(GenBank) AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
pann Pandoraea sp. NE5
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pann03000
]
PanNE5_27580
03036 Chromosome and associated proteins [BR:
pann03036
]
PanNE5_27580
Transcription factors [BR:
pann03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
PanNE5_27580
Chromosome and associated proteins [BR:
pann03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PanNE5_27580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_Crp_2
HTH_34
MarR
HTH_IclR
HTH_20
NirdL-like_HTH
AsnC_trans_reg_3
HMA
MarR_2
LexA_DNA_bind
DUF6900
Motif
Other DBs
NCBI-ProteinID:
BDD93318
LinkDB
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Position
complement(3050912..3051391)
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AA seq
159 aa
AA seq
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MDLDAIDLKILRELQADARLTNVELASRVNLSPSPCLARVKALEAAGYIRQRVTLLDPSR
LGLHINVFIHVTLENQNRDGLDAFETAVTALPNVMECYLMSGDADYLLRVMVSDMSAYET
LITDRLSRIPGIRNIRSSFALKQVLYTTAVPVPDRSGDA
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgacgccattgatctgaagattttgcgggagctgcaagcggacgcccgcctc
accaacgtagaactcgcctcgcgcgtgaacctctcgccgtcgccttgcctggcgcgcgtg
aaagcgctcgaagcggcgggctacattcgccagcgcgtcacgctgctcgatccgtcccgg
ctcgggttgcacatcaacgttttcatccacgtcacgctcgaaaaccagaatcgcgacggt
ctggatgcgttcgaaacggccgtcaccgcattgcccaacgtcatggagtgctacctgatg
tcgggcgacgccgattacctcctgcgcgttatggtcagcgacatgagtgcctacgagacg
ctcatcaccgatcggctctcccgcatcccgggcatccgcaacattcgctccagtttcgcg
ctcaagcaggtcttgtacaccacggccgtcccggtgcccgaccgctccggcgatgcctga
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