Pandoraea sp. NE5: PanNE5_27910
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Entry
PanNE5_27910 CDS
T10412
Symbol
glyA1
Name
(GenBank) serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pann Pandoraea sp. NE5
Pathway
pann00260
Glycine, serine and threonine metabolism
pann00460
Cyanoamino acid metabolism
pann00630
Glyoxylate and dicarboxylate metabolism
pann00670
One carbon pool by folate
pann00680
Methane metabolism
pann01100
Metabolic pathways
pann01110
Biosynthesis of secondary metabolites
pann01120
Microbial metabolism in diverse environments
pann01200
Carbon metabolism
pann01230
Biosynthesis of amino acids
pann01240
Biosynthesis of cofactors
pann04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PanNE5_27910 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
PanNE5_27910 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PanNE5_27910 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PanNE5_27910 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PanNE5_27910 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PanNE5_27910 (glyA1)
Enzymes [BR:
pann01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PanNE5_27910 (glyA1)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BDD93351
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Position
3088003..3089250
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AA seq
415 aa
AA seq
DB search
MFDKSKSTVASVDPDVWAAIQKENQRQEDHIELIASENYTSPAVMEAQGSQLTNKYAEGY
PGKRYYGGCEYVDIVEQLAIDRVKALFGAEAANVQPNSGSQANQGVYFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNENEDIDYDAAEKLAQQHKPKMIVAGASAFAL
RIDFERMSQIAKSVGAYFMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEFEKPINSAIFPGIQGGPLMHVIAGKAVAFKEAASPEFKAYQEQVVKNARVMAETL
VKRGLRIVSGKTESHVMLVDLRAKNITGKAAEAALGEAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFKEAEAELVGNLIADVLENPEDADNLARVRAQVAELTKRFPVYG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaaatcgaaatccaccgttgcctccgtcgatcccgacgtttgggctgcgatt
cagaaagaaaatcagcgtcaggaagaccacatcgagctgatcgcatcggaaaactacacc
agcccggccgtgatggaagcgcagggctcgcaactgaccaacaagtatgcggaaggttat
ccgggcaagcgctactacggtggttgcgagtatgtcgacatcgtggaacaactggccatt
gatcgcgtgaaggcgctgttcggtgccgaagccgcgaacgtgcagccgaactcgggctcg
caggctaaccagggcgtgtacttcgccatgctcaagccgggcgacaccatcatgggcatg
agcctggcgcacggtggccacctcacgcacggctcgccggtgaacatgtcgggcaagtgg
ttcaacgtggtgagctacggcctgaacgagaacgaagacatcgattacgacgctgccgag
aagctcgcgcagcagcacaagccgaagatgatcgtggcgggcgcctcggccttcgccttg
aggatcgacttcgagcgtatgtcgcagatcgccaagtcggtcggcgcgtacttcatggtc
gacatggcgcactatgccggtctgatcgccgccggtgtgtacccgaacccggtgccgcat
gccgacttcgtgacgacgaccacgcacaagagcctgcgcggcccgcgcggcggcgtgatt
ctgatgaaggccgagttcgagaagccgatcaactcggccatcttcccgggcatccagggc
ggcccgctcatgcacgtgatcgccggcaaggccgtcgcgttcaaggaagccgcgtcgccg
gaattcaaggcgtaccaggaacaagtcgtgaagaacgcccgcgtgatggccgagacgctg
gtcaagcgcggcctgcgtatcgtgtcgggcaagaccgaatcgcacgtgatgctggttgac
ctgcgcgccaagaacatcaccggcaaggccgcggaagcggcgctgggcgaagcgcacatc
actgtgaacaagaatgcgattccgaacgatccggaaaagccgttcgtgacgagcggcgtg
cgtctgggctcgccggccatgacgacgcgcggtttcaaggaagctgaagccgaactcgtc
ggcaacctgatcgccgacgtgctggaaaacccggaagacgccgacaacctggctcgtgtg
cgcgcacaagtggctgagttgacgaagcgtttcccggtctacggctaa
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