Pandoraea sp. NE5: PanNE5_28810
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Entry
PanNE5_28810 CDS
T10412
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pann Pandoraea sp. NE5
Pathway
pann03030
DNA replication
pann03430
Mismatch repair
pann03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PanNE5_28810 (dnaQ)
03430 Mismatch repair
PanNE5_28810 (dnaQ)
03440 Homologous recombination
PanNE5_28810 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pann03032
]
PanNE5_28810 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pann03400
]
PanNE5_28810 (dnaQ)
Enzymes [BR:
pann01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PanNE5_28810 (dnaQ)
DNA replication proteins [BR:
pann03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PanNE5_28810 (dnaQ)
DNA repair and recombination proteins [BR:
pann03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PanNE5_28810 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BDD93441
LinkDB
All DBs
Position
complement(3204459..3205199)
Genome browser
AA seq
246 aa
AA seq
DB search
MRQLILDTETTGLNAKTGDRLLEIGCVELVNRRLTGNNLHFYINPERDSDPGALAVHGLT
TEFLSDKPKFAEIAEELREYCRDAEIIIHNAAFDLGFLDMEFARLGWPPFMQHCSSLIDT
LLRAREMFPGRRNSLDALCERLGVNNAHRTLHGALLDAELLADVYLAMTRGQESLVIEIG
DGDGGDVGTQREKISLRQFDLPVIAAADDEVAQHAGVLNDIDKGMKGTCVWRIEPAPPEG
DTAQTA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaactgatcctcgataccgaaaccaccggcctgaatgcgaagacgggggaccgt
ctgctggaaatcggttgcgtcgaactggtcaatcgccgcctgaccggcaacaacctgcac
ttctatatcaaccccgagcgcgacagcgatccgggcgcattggcggtgcacggactcacc
accgaattcctttccgacaaacccaaattcgccgagattgcggaagagttgcgcgagtac
tgccgcgacgccgaaatcattattcacaacgcggcgttcgacctgggcttcctggatatg
gaattcgcccgcctcggctggccgccgttcatgcagcattgctcgagtctgatcgacacg
ctgctgcgtgcccgggagatgttccccggtcgacgcaattcgctggacgccctctgtgag
cgtctcggcgtgaacaacgcgcaccgtacgctgcacggcgccttgctcgacgcggaattg
ctcgccgacgtgtacctcgccatgacgcgcggccaggagagtctcgtcatcgagatcggc
gatggcgacgggggcgatgtgggcacccagcgcgaaaagatttcgttgcgccagttcgat
cttcccgtaatcgcggcagcagatgacgaggtcgctcagcatgccggtgtgctgaacgac
atcgacaaggggatgaaggggacgtgcgtatggcgtatcgaaccggcgcccccggaaggc
gacacggcacaaacggcgtga
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