Pandoraea sp. NE5: PanNE5_29390
Help
Entry
PanNE5_29390 CDS
T10412
Symbol
dcm
Name
(GenBank) type II DNA modification methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pann Pandoraea sp. NE5
Pathway
pann00270
Cysteine and methionine metabolism
pann01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PanNE5_29390 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pann03000
]
PanNE5_29390 (dcm)
03032 DNA replication proteins [BR:
pann03032
]
PanNE5_29390 (dcm)
03036 Chromosome and associated proteins [BR:
pann03036
]
PanNE5_29390 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pann02048
]
PanNE5_29390 (dcm)
Enzymes [BR:
pann01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
PanNE5_29390 (dcm)
Transcription factors [BR:
pann03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
PanNE5_29390 (dcm)
DNA replication proteins [BR:
pann03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
PanNE5_29390 (dcm)
Chromosome and associated proteins [BR:
pann03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
PanNE5_29390 (dcm)
Prokaryotic defense system [BR:
pann02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
PanNE5_29390 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
DUF7130
Motif
Other DBs
NCBI-ProteinID:
BDD93499
LinkDB
All DBs
Position
complement(3273522..3275333)
Genome browser
AA seq
603 aa
AA seq
DB search
MIRDQFLLDISPELIIDNFAGGGGASCGIELALGRHVDHAINHDPEAVAMHAMNHPQTEH
HCESVWDVDPLALTQGRTVGLAWFSPDCKHFSKAKGGKPRDKKIRGLAWVAMRWAALVRP
RVIMLENVEEFRTWGPVLEDGSPCPRRKGDTFRSFVRQLEAMGYAVEHRELRACDYGAPT
IRKRLFLIARCDGKPVVWPEPTHGAPDSAAVLAGLRKPWRTAAECIDWSIKCSSIFERTK
PLAEATMRRIARGIRRYVIESAKPYIVTLSHGEGKPGAAKRWGSGARSIDAPFQTVTANS
SYAVVTPILTECANASAQRSWAADEPLRTQCAEVKGGHFALASATLVQTGYGERPARWRC
TACATIYDRADLPVCGCVKCGSLEDPVLIAGQAPRAPGLDKPLGTVVAGGAKHALVSAFL
AKHYGGNYDGPGVDLDEPASTVTTTDHHALVSSNMVKLRGECTGSATAEPVPTISAQGNH
IGEVRAFLVKYYSEGGQDQDCRDPMHTIPTKDRLGLVTVAGEQYQIADIGMRMLEPHELY
AAQGFPASYVIAPVFNGKRMPKHAQVRMCGNSVSPPMAAALVRANVPEMAAWTAKERRVG
VAA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgataagagaccaattcctgctggacatctcccccgagctgatcatcgacaacttcgcc
ggcggcgggggcgcaagttgcggcattgagctggcgcttggccgtcacgtcgaccacgcc
atcaaccacgaccccgaggccgtggcaatgcacgcgatgaaccacccgcagacggaacac
cactgcgaatcggtgtgggacgtcgatccgctcgcgctgacgcaaggtcgcaccgtcggc
ctcgcctggttctcgccggactgcaagcacttcagcaaggccaagggtggcaagccgcgc
gacaagaagattcgcggcctggcatgggtggcgatgcgctgggccgcgctggtgcgcccg
cgcgtcatcatgctggagaacgtcgaggaattccggacgtggggcccggtgctggaagat
ggttcgccgtgcccgcgccgcaagggcgacacgttccgttccttcgtccgtcagcttgag
gcgatgggatacgcggtcgagcaccgcgaactgcgcgcgtgcgactacggcgcgccgacg
atccgcaagcgcctgttcctgattgcccgctgcgatgggaagccggtcgtctggcccgag
ccgacgcacggggcgccggacagcgccgctgtgctcgcaggtctgcgcaaaccgtggcgc
acggccgccgagtgcatcgactggtcgatcaagtgctcgtcgatcttcgagcgcaccaag
ccgcttgccgaggccaccatgcgtcgaatcgcgcgcggcatccgccgctacgtgatcgag
tcggccaaaccgtacatcgtgacgctctcgcacggcgagggcaaacccggggccgcgaag
cgctggggttcgggcgcgcgcagtatcgatgctcccttccagacggttacggccaacagt
tcgtatgccgtggtgacgcccattctgaccgagtgcgccaacgcatcggcgcaacgatcg
tgggcggcagacgagccgctgcgcacccagtgcgccgaggtcaagggcggtcacttcgcg
ctcgcgtccgcaacgctggtgcagaccggctacggcgagcgtcccgctcgctggcgatgc
acggcgtgtgcgacgatctacgatcgcgcggacctccctgtgtgcgggtgtgtgaagtgc
ggttcccttgaagatccggtgctcatcgccggccaggcgccgcgcgcacctggtctcgac
aagccgctcggtacggttgtggccggcggcgcgaagcacgcgctggtgtcggctttcctt
gccaagcactacggcgggaactacgacggacccggcgtcgacctcgatgagccggcaagc
acagtcacgaccaccgaccatcacgcgctggtgtcatcgaacatggtaaagctgcgcggc
gagtgcacgggaagcgctaccgcagagcccgtgccgacgatctcggcgcagggcaaccat
atcggcgaggttcgcgccttcctggtgaagtactacagcgaaggcggtcaggatcaggac
tgccgagacccgatgcacactatcccgaccaaagatcgtctcggcctggtcaccgtcgct
ggcgagcaataccagatcgccgacatcggcatgcgcatgctcgagccgcacgagttgtac
gcggcgcagggcttccccgcgtcctacgtcatcgcgcccgtgttcaacgggaagcgcatg
ccaaagcacgcccaggtgcgcatgtgcggcaacagcgtcagcccgccaatggccgccgcg
ctcgtgcgcgcgaacgtgccggaaatggcggcctggacagctaaggaacgccgtgtgggg
gtggcagcgtga
DBGET
integrated database retrieval system
