Pandoraea sp. NE5: PanNE5_30140
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Entry
PanNE5_30140 CDS
T10412
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pann Pandoraea sp. NE5
Pathway
pann03420
Nucleotide excision repair
pann03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PanNE5_30140
03430 Mismatch repair
PanNE5_30140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pann03400
]
PanNE5_30140
Enzymes [BR:
pann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PanNE5_30140
DNA repair and recombination proteins [BR:
pann03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PanNE5_30140
MMR (mismatch excision repair)
Other MMR factors
PanNE5_30140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BDD93574
LinkDB
All DBs
Position
3333439..3335760
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AA seq
773 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQHGHVGPAGILAVTF
TNKAAKEMQARLGAMLPISTRAMWIGTFHGLCNRMLRAHFRDAGLPQSFQILDQADQLSA
IKRLLKASNVDDEKYPPKNLQYFINNAKEQGLRPHEVEANDAFNQKFVELYAAYQAQCQR
EGVVDFAELLLRCYELLKHNEPLRVHYQSRFRHVLVDEFQDTNKLQYAWLKMLAGSNAAV
FAVGDDDQSIYAFRGANVGNMADFEREFRVRHLIKLEQNYRSHGNILDAANALISNNARR
LGKNLRTDAGHGEPIRVYEAATDLQEASWLVEEIKALVAQGLSRQDVAILYRSNAQSRVM
EHALVGAGIAYRVYGGLRFFERQEVKHALAYLRLIENPNDDTAFARVVNFPTRGIGARSL
EQLADAARLYNCSMYAAVPYMTGKAGTNLTAFVRLVEQMRHDTERLTLPEVVARVIDASG
LMAHYQTEKEGQDRIENLQELVHAATAFVAEEGYGLDAPARLIAMRPALPGAPDVLASPD
GVVDADTPVEMTPLAGFLSHASLEAGDNQAEAGQDAVQLMTVHAAKGLEFTAVFVTGLEE
GLFPHENSALELDGLEEERRLMYVAITRAKERLYLSFTQSRMLHGQTRYNVRSRFFDEIP
ETVLKFLTPRAQPGARLGQAEPAWGRDWFGRGKTSAPKPEEWVATQSEQALADRSRASET
GFKLGQGVFHTKFGEGKIIGLEGAGAEARAHVKFGRHGEKWLALAVAKLQPIE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgccaatctgaaccccgaacaactggccgccgtaacccttccggac
gagccggcccttattctggcgggcgcgggttccggcaagacgcgcgtgctgaccacgcgt
attgcctggctgatccagcacgggcacgtggggccggccgggattctggccgtcaccttc
accaacaaggcggccaaggaaatgcaggcccgtctgggcgcgatgctgccgatcagcacg
cgcgccatgtggatcggcaccttccacgggttgtgcaaccgtatgctgcgcgcgcatttt
cgcgacgccgggctgccgcagagcttccagatcctcgaccaggccgaccagctctccgcg
atcaagcgtctgctgaaggcgtcgaatgtcgacgacgagaagtatccgccgaaaaacctg
cagtatttcatcaacaacgccaaggaacagggcctgcgcccgcacgaggtcgaggccaac
gacgccttcaatcagaagttcgtcgagctttacgccgcctatcaggcgcagtgccagcgc
gaaggcgtggtcgatttcgccgaactgctgctgcgctgttacgagctgctcaagcacaac
gagccgttgcgcgtgcactaccagtcgcgcttccggcacgttctggtcgacgagttccag
gatacgaacaagctccagtacgcgtggctcaagatgctcgcgggatcgaacgccgcggta
ttcgccgtgggcgacgacgatcagagtatttatgcgtttcgtggcgccaacgtcggcaat
atggccgacttcgagcgtgaattccgcgtgcgccacctgatcaagctggaacagaactac
cgctcgcacggcaatatcctcgacgcggccaacgcgttgatttccaacaatgcgcggcgt
ctgggcaagaatttgcgcaccgacgcggggcacggcgagccgatccgtgtctatgaggcg
gccaccgacctgcaggaagcgagctggctcgtcgaagagatcaaggcactcgttgcgcag
ggtctctcgcggcaggacgtcgccattctctatcgcagcaacgcccagtcgcgggtgatg
gagcacgcgctcgtgggggcgggcatcgcctatcgggtgtatggcggtttgcgctttttc
gagcgtcaggaagtcaagcatgcgctggcgtatctacgcctgatcgagaatccgaacgat
gatacggcgttcgcgcgggtcgtgaatttcccgacgcgggggattggcgcgcgttcgttg
gagcaactggccgacgcggcgcgactctacaactgctcgatgtatgccgcagtgccctac
atgaccggcaaggcgggcacgaatctgacggcattcgtgcggctcgtggagcagatgcgc
cacgataccgagcggctcacgctgccggaggtggtggcgcgggtcatcgacgccagtggg
ttgatggcgcattatcagaccgagaaggaaggccaggatcgcatcgagaacttgcaggaa
ttggtgcatgcggccacggcattcgttgccgaggaaggttatgggctcgatgccccggcg
cggttgattgccatgcgtcctgcgctgccgggcgcgcccgacgtgctggcctcgcccgac
ggcgtggtcgacgccgatacgccggtggagatgacgccgcttgccggcttcctgtcgcac
gcgtcgctcgaagcgggagacaaccaggccgaggccgggcaagacgctgtgcagttgatg
acggtacacgcggccaaggggcttgaatttacggcggtgttcgtcaccggtctcgaagag
ggactcttcccgcacgagaacagtgcgctcgaactcgacggtctcgaagaagagcggcgc
ctgatgtacgtggccattacgcgtgccaaggaacggctgtatctgtcgttcacgcaaagc
cgcatgctgcacggacagacgcgttacaacgtgcgctcgcgcttcttcgacgaaatcccc
gagacggtgttgaagttcctgacaccgcgggcgcagccgggcgcgcggctggggcaggcc
gagccggcctgggggcgcgattggttcgggcggggcaagacgagtgcgccgaagccggaa
gaatgggtggccacccagtcggagcaggcgctggccgaccgttcgcgcgcgtcggagacg
ggcttcaagttggggcagggcgtttttcacaccaagttcggcgaaggcaagatcatcggc
ctggagggcgcgggggcggaagcccgcgcccacgtgaaattcggccgacatggtgagaag
tggctggcgctggctgtcgcgaagcttcagccgatcgagtaa
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