Pandoraea sp. NE5: PanNE5_35490
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Entry
PanNE5_35490 CDS
T10412
Name
(GenBank) RND transporter MFP subunit
KO
K18302
membrane fusion protein, multidrug efflux system
Organism
pann Pandoraea sp. NE5
Module
pann_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pann02000
]
PanNE5_35490
01504 Antimicrobial resistance genes [BR:
pann01504
]
PanNE5_35490
Transporters [BR:
pann02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PanNE5_35490
Antimicrobial resistance genes [BR:
pann01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PanNE5_35490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
BDD94109
LinkDB
All DBs
Position
complement(3956717..3957958)
Genome browser
AA seq
413 aa
AA seq
DB search
MSPFVSYERTMPLLPDIAPRRLALAVAITAIAALLSACSRKAPPEVPPRPVVAVAAKVAE
HAPVVSLPAQIEARYVTPLSFRVAGQIIERSVRLGDAVKAGQIVARLDPGDLSKQAASAR
AQLDAAQHQLDYATQTVTRDRAQARENLIAPAQLEQSENAYASALAQRNQATQQAALAGD
QLNYGSLKADRDGVITAEQADTGQNVSAGQPVYQLAWTGDVDVITDVPEVVLGALRVGQM
TTVSLPAVPGKTWQARVREIAPAADPTSRTYRAKLSLLSPSPDVKLGMTANVAFAQPFAP
PVAPPVAPSTTSATPAAMVSGGPAATPLADGPPITLPSTALFHEGDQPAVWVVKSDDTLV
LRRVEIARYGERTVTIAGGIQPGERVVWQGAHTVTAGEKVRVIAPLHPEDFAS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtctccctttgtcagttacgagcgcacgatgccccttctgcccgacatcgcaccacgc
cgccttgccctggccgtcgccatcacggccattgccgccctattgagcgcgtgttcgcgc
aaagccccgccagaggtgcccccgcgcccggtcgtggcggtggcggccaaggtcgccgag
cacgcgcccgttgtgtcgctaccggcgcaaatcgaggcgcgctacgtcacgccgctctcg
ttccgtgttgcaggccagatcatcgagcgcagcgtgcgactcggcgacgccgtcaaggcg
ggccagatcgtcgcccggctggatccgggcgatctctcgaagcaggctgccagtgcgcgc
gctcagctcgacgcggcgcagcaccaacttgattacgcgacacaaaccgtcacccgtgac
cgcgcgcaagcccgcgaaaacctcatcgccccggcgcagctggaacaatcggagaatgcc
tacgcgagcgcgctcgcccagcgcaatcaggcgacgcagcaggccgcactggccggcgac
cagttgaactacggcagcctcaaggcggatcgcgacggcgtgatcaccgccgagcaagcc
gatacgggacagaacgtcagcgcgggtcagccggtttaccagctggcatggacgggcgac
gtcgatgtgattaccgacgtgcccgaagtcgtgctcggcgccctgcgcgtcgggcagatg
acgaccgtctcgctgcccgcggtgccgggcaagacgtggcaagcgcgggtgcgtgaaatc
gcgccggcggccgatcccacgagccgcacttaccgagccaagctctcgctgctctcaccc
agtcccgacgtcaaactcggcatgacggccaacgtcgcgttcgcacaacccttcgcgccg
ccggtcgccccacctgtggcaccgtcgacgacatcggccacgcccgccgcaatggtgtcc
ggcgggcccgccgccaccccactcgccgacggtccgcccatcacgctaccgtcgaccgcg
ctctttcacgagggcgatcaacccgcggtgtgggtcgtcaaatccgacgacacgctggtg
ctgcgacgcgtggagattgctcgctacggcgagcgcaccgtcaccatcgcgggcggcatt
caacccggtgagcgcgtcgtctggcaaggcgcgcacaccgtcaccgccggcgagaaggtt
cgcgtgattgcgccgctgcaccccgaggacttcgcgtcatga
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