Pandoraea sp. NE5: PanNE5_41520
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Entry
PanNE5_41520 CDS
T10412
Name
(GenBank) hypothetical protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pann Pandoraea sp. NE5
Pathway
pann03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PanNE5_41520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pann03400
]
PanNE5_41520
Enzymes [BR:
pann01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PanNE5_41520
DNA repair and recombination proteins [BR:
pann03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PanNE5_41520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BDD94712
LinkDB
All DBs
Position
complement(4649215..4650420)
Genome browser
AA seq
401 aa
AA seq
DB search
MVTRNSVAAKVATKTAAAKGAKGAVKATRSVAPTDDGERRAPAKVAGKRATTNVKSGRKT
ATGNTAAKPTQAGAARKAAPPPAQKTAKQVAQKVARKVAEKGVEKRVQKRVQKSAEKSAT
PVTDKVAKKAAPKAGTKVARKAPVKAAPSTPDDARRVIAKRDGETRIVTPEIERIDHDIV
EQVVTGVVPLPVAAGATRPLYWDQACADLMKRDRILKKLIPQFGPAHLTGRGEPFVTLAR
SIVGQQISVKAAQAVWDRVQATCPKLTPAQFIKVGHDALAGCGLSRRKAEYILDLATHFK
SGALHVDAWASMDDEAVIAELTGIRGIGRWTAEMFLMFNLLRPDVLPLDDVGLINAISVN
YFSGEPVTRSEAREVAANWEPWRSVATWYMWRSLEPVPVEY
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggtgactcgtaactccgtggccgctaaggtggcgaccaaaactgccgcagcgaagggc
gcgaagggggccgtgaaggccaccagatcggtcgcgccgaccgacgatggcgaacgccgt
gcgccggccaaggtggccggcaagcgcgcgacgacgaacgtcaagtcgggtcgcaagacc
gcgacggggaacacggcggcgaagccaacgcaggccggcgccgcccgcaaggccgcgccg
ccgccggcgcaaaaaaccgcaaagcaggttgcgcaaaaggtcgccagaaaagtcgcagag
aagggcgtagaaaagcgcgtacaaaagcgcgtgcaaaaaagcgcggaaaagtctgcaacg
ccggtcaccgacaaggtcgcaaaaaaggccgcaccgaaggctggaacgaaggtcgcgcgc
aaggcgccggtgaaggccgcgccgtcgacgcccgacgacgcgcgccgggtcatcgccaag
cgcgatggcgagacgcgtatcgtgacgcccgagatcgagcgcatcgaccacgacatcgtc
gagcaggtcgtgacaggcgtggtgccgctaccggtcgcggcgggggcgacgcgcccgctc
tactgggatcaggcctgcgccgacctcatgaagcgcgaccgtattctcaagaagttgatc
cctcaatttggtccggcccatctgaccgggcgcggcgagccgttcgttacgctggcgcgc
tcgatcgtcggtcagcagatttcggtgaaggccgcgcaggccgtgtgggatcgcgtgcag
gccacctgtccgaagctcacgccagcgcagttcatcaaggtagggcacgatgcgctcgcc
ggttgcgggctgtcgcgccgcaaggccgagtacattctcgacctggcaacgcacttcaaa
tccggcgcgctacacgtcgacgcctgggccagcatggacgacgaggcggtcattgcggag
ttgaccggcattcgcggcatcggtcgctggaccgccgaaatgttcctgatgttcaacctg
ttgcgccccgacgtcctgccgctcgacgatgtcgggctgatcaacgccatcagcgtcaat
tatttcagcggggagcccgtcacacgcagcgaagcgcgtgaagtggccgccaattgggag
ccgtggcgctccgtcgccacctggtatatgtggagaagcctcgaaccggtgcccgtcgaa
tactga
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