Pandoraea sp. NE5: PanNE5_42660
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Entry
PanNE5_42660 CDS
T10412
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pann Pandoraea sp. NE5
Pathway
pann00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PanNE5_42660 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pann01007
]
PanNE5_42660 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pann03016
]
PanNE5_42660 (lysS)
Enzymes [BR:
pann01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PanNE5_42660 (lysS)
Amino acid related enzymes [BR:
pann01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PanNE5_42660 (lysS)
Transfer RNA biogenesis [BR:
pann03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PanNE5_42660 (lysS)
Prokaryotic type
Other AARSs
PanNE5_42660 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BDD94826
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All DBs
Position
4772146..4773690
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AA seq
514 aa
AA seq
DB search
MTDHNTPAHTGTPAGDLPHDDNKLIAERREKLQALRANGVAFPNDFRPEQHAGDLQARYQ
DVNNEVLEAEPVPVSVAGRMMLKRVMGKAAFATVQDGSGQIQFFIGRDDVGADAMTAFKG
WDIGDIVAATGTLFRTRTGELSVKVKALRLLAKALRPLPDKFHGLSDQETKYRQRYVDLI
TSPETRSTFRARAKAIASMRKYMTDADFMEVETPMLHPIPGGAAAKPFITHHNALDMQMY
LRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTE
ALIRNAALDARGTATIEYQGRELDLSKPFHRLTIVEAIRKYAPEFTEAQLADIEFVRGAL
GKYGVKVDAPQFKNAGLGALQLALFEETAESQLWEPTFIVDYPVEVSPLARESDTVPGIT
ERFELFITGREIANGFSELNDPEDQAARFRAQVEQKDAGDEEAMYYDADYIRALEYGMPP
TGGCGIGIDRLIMLLTDSPNIRDVLLFPHLRRED
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcacaatactccggcccacacgggcaccccggcgggcgacctgccgcacgac
gacaacaagctcatcgcggagcgtcgcgagaaactgcaggcgctgcgtgccaacggcgtg
gcgttcccgaacgacttccgtcccgaacagcacgccggcgacctgcaggcgcgctatcag
gacgtgaacaacgaggtgctcgaagccgagcccgtccccgtgtcggtggccggtcgcatg
atgctcaagcgcgtgatgggcaaggccgccttcgccaccgtgcaggacggcagcggtcag
atccagttcttcatcggccgcgacgacgtcggcgccgatgccatgaccgccttcaagggc
tgggacatcggcgatatcgtcgccgcgaccggcacgctgttccgcacgcgcaccggcgaa
ctgtcggtcaaggtgaaggcactgcgtctgctcgccaaggcgctgcgcccgctgccggac
aagttccacggcctgtccgaccaggagacgaagtaccgtcagcgctacgtcgacctgatc
acctcgcccgagacgcgcagcacgttccgcgcccgcgcgaaggccatcgcgtcgatgcgc
aagtacatgaccgacgccgacttcatggaagtcgaaacgccgatgctgcacccgattccg
ggcggcgccgcggccaagccgttcatcacgcaccacaacgcgctcgacatgcagatgtat
ctgcgtatcgcgccggagctgtatctgaagcgcctgatcgttggcggcttcgagcgtgtg
ttcgagatcaaccgtaacttccgcaatgaaggcgtatcgccgcgccacaacccggaattc
acgatgatggagttctacgcggcctacacggactaccgttggctgatggacttcaccgaa
gcgctgatccgcaacgccgcactcgacgcgcgcggcaccgcgaccatcgagtaccagggc
cgcgaactcgatttgtccaagccgttccaccgcctgacgatcgtcgaagcgattcgcaag
tacgcgcccgagttcaccgaagcgcaactggccgacatcgaattcgtgcgtggcgcgctg
ggcaagtatggcgtgaaggtcgatgcgccgcagttcaagaacgcgggcctcggtgcgctg
caactggccctgttcgaagagacggccgagagccagttgtgggagccgactttcatcgtc
gactatccggtggaagtctcgccgctcgcgcgcgagtccgataccgtgccaggcatcacc
gagcgcttcgaactgttcatcacgggccgcgagatcgccaacggcttctccgagttgaac
gacccggaagatcaggccgcacgctttcgtgcgcaggtcgagcagaaggacgcgggcgac
gaagaggccatgtattacgacgcggattacattcgcgcgctcgagtacggcatgcccccg
acgggcggctgcggcatcggcatcgaccgtctgatcatgctgctcaccgacagtccgaac
attcgcgacgtgctgctcttcccgcacctgcgccgcgaagactga
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