Pandoraea sp. NE5: PanNE5_43230
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Entry
PanNE5_43230 CDS
T10412
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pann Pandoraea sp. NE5
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pann03400
]
PanNE5_43230
Enzymes [BR:
pann01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PanNE5_43230
DNA repair and recombination proteins [BR:
pann03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PanNE5_43230
Prokaryotic type
PanNE5_43230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BDD94883
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All DBs
Position
complement(4828811..4830307)
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AA seq
498 aa
AA seq
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MSDFHKGLVWIRRDLRCTDNATLAHALATCQAVYVVFVFDTTILDVLPRDDRRVAFIHDS
VSELATTLTHAGGALIVRHGDPVAEIPSLAKSLGVQAVFAGRDYEPAAVARDRSVARSLD
ERGIAFEVVKDQVIFEASEILTAQGEPYSVFTPYQRAWLKQVRPVDLAPHGRDADRRRLA
VPPTGSGALPSLASLGFEVSDARRMAIPAGESGARQLLDDFLPRMAHYHERRDYPAIRGP
SYLSVHLRFGTISIRTLAREAHAAMLRGGDDGRGAQTWLSELIWREFYFMILHHHPRVVA
QAFKPAYDAIEWAAGQAADADFQAWCEGRTGYPLVDAAMRQINQTGYMHNRLRMVTASFL
VKDLGIDWRRGEAYFAHALNDFDLAANNGGWQWAASTGCDAQPYFRIFNPVTQSEKFDPQ
GRFIRKYVPELANLPDKALHAPWRADAQTLLDAHVALGRDYPPPRVAHDVARKETLARYA
VVKTPAVSGKRDDGLDAD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttccataaggggttggtttggatccggcgcgacttgcgctgcacggacaac
gcaacgctcgcgcacgcgcttgccacgtgccaagcggtgtatgtcgtgtttgtgttcgac
acaacgattctcgacgtcttgccgcgcgacgatcgtcgtgtcgcattcatccacgacagc
gtgagcgaattggccaccacgctgacgcatgccggcggggcattgattgtgcgccacggg
gatccggtggcggagattccgtcgctggcgaagtcgctcggcgtacaggccgtgtttgcc
gggcgcgattacgagcccgccgccgtggcacgcgatcgctcggtggctcgctcgctcgac
gaacgcggcattgccttcgaggtcgtcaaggatcaggtgattttcgaggcgagtgagatt
ctcacggcgcagggcgagccgtacagcgtgttcaccccgtatcagcgcgcttggttgaag
caggtgagaccggtggatttggcgccgcacggccgcgacgccgatcggcggcgattggct
gtgccaccgacgggcagcggtgcactcccgtcactggcgtcgttgggcttcgaggtgtcc
gacgcgcgccgtatggccatccctgccggggagtctggcgcccgtcaattgctggacgat
tttctgccgcgcatggcgcattaccatgagcgacgcgactaccctgccatacgcgggccg
agctatctgtcggtacatctgcgtttcggcacgatttcgatacgcacgctcgcccgcgag
gcgcacgccgccatgttgcgagggggggacgacggtcgcggcgcgcaaacatggctcagc
gagcttatctggcgcgagttctatttcatgatcctgcaccatcatccgcgcgtcgtggca
caggcgttcaaacctgcctacgatgccatcgaatgggctgccggccaagcggccgatgcc
gattttcaggcctggtgcgagggacgcacggggtatccgctcgtcgatgccgccatgcgc
cagatcaaccagactggctatatgcacaaccgcctgcgcatggtgacggcgagcttcctg
gtcaaggatctcggtatcgattggcggcgcggggaagcctactttgcgcacgcgctcaac
gacttcgacctcgcggcgaacaacggcggctggcagtgggcggcgtcgaccggatgcgac
gcgcaaccgtatttccgcatcttcaatccggtgacgcagtctgagaagttcgatccgcaa
gggcgcttcattcggaagtacgtgccggagctggccaatctgcccgacaaggcgctgcat
gctccctggcgggccgacgcgcagacgctgctcgatgcccacgtggcgctgggacgcgac
tatccgccgccgcgggtggcgcacgacgtggcgcgcaaggaaacgctggcacgatatgcg
gtcgtgaagacgccggcggtttccggcaagcgcgatgacggcttggatgcggactga
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