Pandoraea sp. NE5: PanNE5_44600
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Entry
PanNE5_44600 CDS
T10412
Symbol
selB
Name
(GenBank) selenocysteine-specific translation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
pann Pandoraea sp. NE5
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pann03012
]
PanNE5_44600 (selB)
Translation factors [BR:
pann03012
]
Eukaryotic type
Elongation factors
PanNE5_44600 (selB)
Prokaryotic type
PanNE5_44600 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_3rd_SelB
WHD_2nd_SelB
GTP_EFTU_D2
WHD_2nd_SelB_bact
MMR_HSR1
DUF5817_CT
SRPRB
TrmB
Motif
Other DBs
NCBI-ProteinID:
BDD95020
LinkDB
All DBs
Position
complement(4973708..4975618)
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AA seq
636 aa
AA seq
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MIVGTAGHIDHGKTSLVRALTGVDTDRLKEEKARGISIELGYAYTPLPDGEVLGFIDVPG
HEKLIHTMAAGAVGIDFALLVIAADDGIMPQTREHLAILSMLGVRRGVVALSKADRVDAA
RLAAVTQEISQWLANTPFAEAETVPVSATTPGDTGVAVLRERLTQAAQALHSSGNAARRE
DALFRLAVDRVFTLAGHGTVVTGTAFAGTVRVGDNLTVMPQGLPVRVRSVHAQNRPVEAG
RAGERCALNLAGVERDQLRRGNWIVAAGLPGPSTHVDVELHWLEDSAPLTQWFPLHVHVG
TTHGQARTVLLEGDTLAPGGTMRVQLVFDTPVCTMPGDRFIVRNPQATATVGGGRVLDPA
APERRRRSAARLAWLDAVARALDGEGLDALLAQAAFGLTSEQVIALTGLPAGQWQWPANA
VVLAGGEGESLAFAPQAWDTVRTRVLDVLRDYHARQPDEPGLDAARLGRMTWPSMDAWRW
RAFVQAMLRDGALARTGAWWHLPAHRVEMTDDETALADALLPLVVQGRFDPPWVRDMGRS
LNVPEERVRAVLRKLARQGRVHQIVKDLFYDDACVQTLAGMIADAGGKVEAAAFRDTTGL
GRKRAIQILEFFDRAGYTRRVGDWHVRRPGAEWGAA
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgggcaccgccggtcacatcgatcatggcaagacgagtctcgttcgcgcgttg
accggggtcgacacggatcgtctgaaagaagaaaaggcgcgcggcatttccatcgaattg
gggtatgcctacaccccgttgccggatggcgaggtgttgggattcatcgatgttcccggc
catgaaaagctgattcacacgatggccgcgggggccgtcggcattgatttcgcgctgctc
gtgattgcggcggacgacggcatcatgccgcagacgcgcgagcatctcgccattctttcg
atgctgggggtgaggcgtggcgtggtcgcgctatcgaaagcggatcgcgtcgacgcggcg
cggctggccgctgtgacccaggagatttcgcaatggctcgcgaacacgccgttcgccgag
gccgagacggtgccggtgtcagcgacgacgccgggcgacacgggcgtggcggtgctgcgc
gagcggcttacgcaggcggcgcaggcattgcactcgtccggcaatgcggcgcgtcgcgag
gacgcattgtttcgtctcgccgtcgatcgtgtcttcacgctggcaggccatggtacggtc
gtgaccggcacggcgttcgctggcacggtgcgcgtgggggacaacctcaccgtgatgccg
cagggattgccggtgcgggtgcgcagcgtgcatgcgcagaaccgtccggtggaggcgggg
cgcgccggggagcgttgtgcgctgaatctggcgggggtggagcgcgaccagcttcggcgg
ggcaactggatcgtggcggcgggattgccggggccgtcgacgcatgtggatgtcgaactg
cactggcttgaagacagtgcgccactcacgcaatggtttccgctgcatgtgcatgtgggc
acgacgcatgggcaggcccgcacggtattgctggaaggggacacgctggcccccggtggc
acaatgcgcgtgcaattggtcttcgatacgccggtgtgcacgatgccgggcgaccgcttc
atcgtgcgcaatccgcaggcgacggcaacggtgggtggcgggcgggtgcttgaccctgcg
gcgccggagcgcaggcgtcggtcggcggcgcggttggcgtggctcgacgccgtggcgcgc
gcgctcgatggcgaaggattggatgcactactcgcgcaggccgcgtttggactgacgagc
gagcaggtcattgcgctcaccgggttgccggcggggcaatggcagtggccggcgaatgcg
gtggtgctggcgggaggggagggggaatcgctcgcgtttgcccctcaggcgtgggacacc
gtgcgcacacgcgtgctcgatgtgctgcgcgactatcacgcgcgccagccggacgagccg
ggactcgatgctgcacggctgggccgcatgacgtggccgtcgatggatgcgtggcgttgg
cgcgccttcgtgcaggccatgttgcgcgacggagcgctggcccgtaccggggcgtggtgg
catctgccggcgcaccgtgtggaaatgacggatgacgagacggcgttggctgacgcgctg
ctgccgctggtggtgcagggtcgtttcgatccgccgtgggtgagggacatggggcgttcg
ctgaacgtgcctgaagagcgggtgcgtgcggtattgcgcaagcttgcgagacagggacga
gtgcatcagatcgtgaaggatctgttctacgacgacgcttgtgtccagacactcgccggc
atgatcgccgacgccggcggcaaggtggaagccgctgcgtttcgcgacacgacgggcctg
gggcgcaagcgtgcgatccagattctggagttcttcgatcgtgcgggatatactcgccgc
gttggcgattggcatgtgcgccgccccggggcggaatggggcgcggcgtaa
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