Pantoea anthophila: OJ965_06310
Help
Entry
OJ965_06310 CDS
T08866
Name
(GenBank) LysR family transcriptional regulator
Organism
pano
Pantoea anthophila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
Xre-like-HTH
HTH_Crp_2
HTH_23
DUF2089
Motif
Other DBs
NCBI-ProteinID:
UZH03737
LinkDB
All DBs
Position
complement(788234..789154)
Genome browser
AA seq
306 aa
AA seq
DB search
MANINWRHIEIFHAVMTSGNLTQAATLLHTSQPTVSRELARLEQQLGLQLFERVRGRLQP
TVQGLRLFEEVQRSWYGLDRIREAAEGLRQFRQGELSIACLPVFSQSLLPPLCQPFLARY
PDVSLNVIPQESPLLEEWLSAQRYDIGLTETQHAPAGTDRLALLTCDEVCVLPQHHPLSQ
RAVLTPHDFAGERYVSLSRSDSYRQLLDALFQEQGVERRLVIETHSAASVCAMVRAGTGI
SIVNPLTALDYADSGLVMRKFSVAVPFTVSLVRPRHRPASALVDAFVSHLQEQVTAFPAR
IAARLA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacatcaactggcggcatattgaaatttttcatgcggtgatgaccagtggcaat
ctgactcaggccgccacgctgctgcacacctctcagccgacggtgagccgggagctggcg
cggctggagcagcagctgggactacaactgtttgaacgggtacgcggccggctgcagccg
acggtgcagggattgcgcctgtttgaagaggtgcagcgctcctggtacggtctggatcgc
atccgggaagccgcagagggacttcgccagtttcgtcagggcgagctgtcgattgcctgc
ctgccggttttttctcagtcgctgctgccgccactgtgccagccctttttagcacgttac
cccgacgtgagcctcaatgtgatcccgcaggagtcgccgctgctggaggagtggctctca
gcacagcgctacgatatcggtttaaccgaaacccagcacgccccggccggtaccgatcgt
ctcgccctgctgacctgtgatgaagtgtgcgttctgccacagcaccatcccctgagtcag
cgtgccgtgctgacgccgcatgatttcgctggggagcggtatgtcagcctctcgcgcagc
gacagctatcgtcagctgctggatgcgctgtttcaggagcagggggttgaacggcggctg
gtgatagagacgcacagcgcagcctcggtgtgcgccatggtcagggcgggtacaggcatt
tcgattgttaatccgctgacggcgctggattacgccgacagcggattggtgatgcgtaag
ttcagcgtagcagtgccgtttaccgtcagcctggtcaggccgcggcaccgacccgcctca
gcgctggtcgatgcctttgtcagccatctgcaggagcaggtgaccgcctttccggcacgt
atcgccgctcgcctggcttag
DBGET
integrated database retrieval system
