Pantoea anthophila: OJ965_06385
Help
Entry
OJ965_06385 CDS
T08866
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pano
Pantoea anthophila
Pathway
pano03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pano00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OJ965_06385 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pano03400
]
OJ965_06385 (recC)
Enzymes [BR:
pano01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OJ965_06385 (recC)
DNA repair and recombination proteins [BR:
pano03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OJ965_06385 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UZH03751
LinkDB
All DBs
Position
801398..804775
Genome browser
AA seq
1125 aa
AA seq
DB search
MFHVYHSNQLDVLKILAAAVIKHDPLDDPFASEMILVQSPGMAQWLQMELAQTFGIAANI
EFPLPASFIWEMFVRVLPDIPVESAFSKASMSWKLMHRLPVMLEQEEFTSLRHYLHDDGD
KRKLFQLSSRVADLFDQYLVYRADWLNSWERGESIDGLGEAQRWQAALWRDLVSYTRTLR
QPEWHRANLYARFIRTLEQAKSTPENLPRRVFICGISALPPIYLQALQALGRHIDIHLLF
TNPCRDYWGDIQDYAFLAKLQSRQRRRHDAEAARGLFRDAEQAPQLFNEAGEQQLTNPLL
ASWGKLGRDNLFLLSQMDASDDIDAFVDVEPDNLLHCMQYDLLNLQDSAIIGLNAAELAH
SDRKRLLDPADRSIVVQVCHSAQREVEVLQDHLLAMMEADPTLKARDIIVMVADIDAYAP
FIQAVFANAPADRYLPFAISDRRASQAHPAIVAFLHLLALPDSRFVSEDVLALLDVPALA
SHFAIDESGLRLLRRWVSESGVRWGLDDASVEALSLPITGQHTWRFGLQRMLLGYAMESH
NGDWEGILPYDESSGLVGELAGHLAELLARLNHWRERLAEPRPLAEWLPMCRELLNAFFT
PDAETEAALLLVEEQWQQLIQYGMDARFEEAIPVALLRDDLRSRLDQQRISQRFLAGQIN
FCTLMPMRSIPFQLVCLLGMNDGVYPRTLAPLGFDLMQQQSRKGDRSRRDDDRYLFLEAM
LSAQQQLYISYIGRAIQDNTERYPSVLVTELLDYIGQSFYLEGDGHLELDESAGRVRAHL
QHLNSRMPFAAENFQPAARLQSFAREWLPAAQGAGQPQPEFVQPLTAPDIDALTLEAFLR
FWRHPVRAWFHQRLGVSFWLEEDELPDSEPFALDNLERYQINAQLLNALVEGEDTQRLYA
HHRAAGNLPYGAFGELFWQAQRDEMQEVAAEVVNQRSDGESWEVNLQLEQVSLTGWLTQV
QSDGLLRWRPGVLNMNDGLLLWLEHLIYCALGGTGSSRMYGRQQSRWCFPAVPQSEAMAA
LNDYIAGYLDGLRQPLMLLSKSGGAWLTASYDKKSQQLLTDEATQLKARNRLLTAWSGSY
QVEGEGSDPYLQRLCRVLDEAQLQQITEAAQRWYLPVLAAHQDDE
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacgtctatcactcaaatcagctcgatgtgctgaagattctcgcggctgcggtg
attaaacatgatcctcttgatgaccctttcgcgtcagaaatgatactggtgcagagtccg
ggtatggcgcagtggctgcagatggagctggcgcagacctttggcattgcagccaacatc
gaatttccgctgcccgccagttttatctgggagatgttcgtgcgcgtgctgcccgacatc
ccggtagagagtgccttcagtaaggccagtatgagctggaagctgatgcaccggctgccg
gtgatgctggagcaggaggagtttacctccttacgtcactatctccatgacgacggcgac
aagcgcaaactgtttcagctcagctcccgtgtcgcggatctgtttgaccagtatctggtc
tatcgcgctgactggcttaacagctgggagcgcggcgaaagtatcgacgggctgggcgaa
gcgcagcgctggcaggccgccctgtggcgcgatctggtgagctacacccgcacgctgcga
cagccggaatggcaccgcgcgaatctctatgcgcgatttatccgcacgctggagcaggcg
aagagcacgccggaaaacctgcccaggcgggtctttatctgtggtatctccgcactgcca
ccgatctatctgcaggcgctgcaggcgctgggacgtcacatcgacatccacctgctgttt
accaatccctgccgcgactactggggcgacattcaggactatgccttcctggcgaagctg
caaagccgtcagcgccgccgccatgacgctgaggcggcgcgtgggctgttccgggacgca
gagcaggcgccgcagctgtttaacgaagccggtgaacagcaactgacgaatccgctgctg
gcctcctggggcaagctggggcgtgacaacctctttctgctcagccagatggatgccagc
gacgacatcgatgcctttgtggatgtagagccggacaacctgctgcactgcatgcagtac
gatcttctcaatctgcaggacagtgccatcatcgggctgaacgcggcggaactggcgcac
agcgatcgcaagcgcctcctcgatccggcggatcgttcgatcgtggtgcaggtctgccac
agtgcgcagcgcgaagttgaggtgctgcaggatcatctgctggcgatgatggaggctgat
ccgacgctgaaagcacgcgacattattgtgatggtggccgacatcgacgcttatgcaccg
ttcattcaggctgtgttcgccaatgcgcccgccgatcgctatctgccttttgcgatttca
gaccggcgggccagtcaggcgcatccggccatcgtggcgtttctgcatctgctggcgctg
ccggacagccgttttgtctcagaagatgtgctggcgctgctggatgtgccggcgctggcg
tcccacttcgccatcgatgaaagcggcctgcgtttgctgcggcgctgggtcagcgagtca
ggcgtgcgctgggggctggatgatgccagcgttgaagccctctcactgccgattaccggc
cagcacacctggcgctttggcctgcagcgtatgctgctgggttatgcgatggagagccac
aatggcgactgggaggggattctgccttatgacgagtcgagtggcctcgtgggggagctg
gcgggccatctggctgagctgctcgcgcggctgaatcactggcgtgagcggctggcggaa
ccccgcccgctggcggagtggctgccgatgtgccgggaactgctgaacgccttcttcacg
cctgacgcggaaaccgaggccgctttactgctggtggaagagcagtggcagcaactgatt
cagtacgggatggatgcgcggtttgaggaggcgatcccggtggcgctgctgcgcgatgac
ctgcgcagccggctcgatcagcagcgcatcagccagcgctttctggccgggcagatcaac
ttttgtaccctgatgccgatgcgttcaataccgttccagctggtctgtctgctggggatg
aacgacggcgtctatccgcgcacgcttgcgccgttaggctttgatctgatgcagcagcag
tcccgtaaaggcgaccgcagccgccgtgatgatgaccgttacctgtttcttgaggcgatg
ctctccgctcagcagcagctctatatcagctatatcggccgggcgattcaggataatacg
gaacgctatccctcggtgctggtcacagaactgctggattacatcggacagagtttttac
ctggagggggatggtcatctggagctggatgagagtgccggacgggtgcgggcgcatctg
cagcacctcaacagcaggatgccgtttgccgctgagaatttccagcctgccgccagactg
cagagcttcgcccgcgagtggctgcctgccgcccagggggcggggcagccgcaacccgaa
tttgtccagccgctgacggccccggacattgatgcactcaccttagaggcctttctgcgc
ttctggcggcacccggttcgcgcctggttccaccagcgtctcggcgtgagcttctggctg
gaggaggatgagctgcccgacagcgaaccttttgcgctcgacaacctggagcgttaccag
atcaatgcccagttgctgaatgccctggtcgaaggcgaggatacccagcggctctatgcg
caccatcgcgccgccggtaatctgccctacggcgcatttggcgaactcttctggcaggcg
cagcgtgatgagatgcaggaagtggcggcggaagtggtgaaccagcgcagcgacggcgag
agctgggaagtgaatctgcaactggagcaggtcagcttaaccggctggctgacgcaggtg
cagagcgacgggctcctgcgctggcggcctggcgtcctcaacatgaacgatggcctgctg
ctctggctggagcatctgatttactgcgcgctgggcggcaccggcagcagccgtatgtat
ggccgccagcagagccgctggtgttttcctgccgtgccgcagtcagaggcgatggccgcc
ctgaatgactatatcgccggttacctcgacgggttgcgtcagccgctgatgctgctcagc
aaaagtggcggtgcgtggctgaccgccagctacgacaaaaagagccagcagttactcacg
gatgaagccacgcagctgaaggcgcgcaatcgcctgctgacggcctggtcaggcagctac
caggtggagggagagggcagcgacccctatctgcagcggctctgccgcgtgctggatgag
gcgcaactgcagcagatcactgaggcggcgcagcgctggtatttgccggtgctggccgca
catcaggatgatgaatag
DBGET
integrated database retrieval system
