Pantoea anthophila: OJ965_08660
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Entry
OJ965_08660 CDS
T08866
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
pano
Pantoea anthophila
Brite
KEGG Orthology (KO) [BR:
pano00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pano03400
]
OJ965_08660
DNA repair and recombination proteins [BR:
pano03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
OJ965_08660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
DUF7577
zf-tcix
SLFN-g3_helicase
AAA_22
DZR
AAA_16
Zn_ribbon_3
Zn_Ribbon_1
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
UZH04165
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All DBs
Position
complement(1309552..1311306)
Genome browser
AA seq
584 aa
AA seq
DB search
MSFTLRPYQQDAVNATVAHFRRHQEPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHSKYEAYGLEADIFAAGLQRKESQRKVVFGSVQSIARNLEQFDSAFSLVIVDECH
RIGDDKESQYQQIFSHLRQHNPQLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKSLFRD
CIYELPLRYMIKHQFLVPPERLDMPVVQYDFSRLTAQSNGLFSEADLNRELKQQQRVTPH
IIRQIVEFAEDRLGVMIFASTVDHAREILQLLPENSALVSAETPARERDALILAFKAQQL
KFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKRDCLILDYAGNPH
DLFTPEVGAPKGASDNQPVQVFCPACGFANTFWGKATEDGMVIEHFGRRCQGVLEDDEGE
REQCDYRFRFKSCPDCGAENDIAARRCHQCDKVLVDPDDMLKAALKLKDALVLRCGGMTL
EQGSDAKGEWLKATYHDEDGTSVSERFRLQTPAQRKAFEQLFMRPHQRAPGVPLGWQTAA
DVLALQPLLRHPDFVVARAKGQFWQIREKMFDYQGRYRRANELR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttaccttacgcccctatcagcaggatgcggttaatgccaccgttgcgcatttc
cgtcgtcatcaggaacctgccgtgatcgtactgcccaccggtgccgggaagagcctggtg
atcgccgagctggcacggctggcacgtggccgggtgctggtgctggcgcacgtcaaagag
ctggtggcacagaaccacagcaaatatgaagcgtacgggctggaggcggacatctttgcc
gccggactgcagcgcaaagagagtcagcgcaaagtggtatttggcagcgtgcagtccatc
gcgcgtaacctcgaacagttcgacagcgccttttcactggtgattgtcgacgagtgccat
cgcatcggcgatgacaaagagagccagtatcagcagatcttcagtcatctgcgccagcac
aatcctcagctccgtttactcggcctgaccgccacgccgttccggctgggcaaaggctgg
atctatcagtttcattatcacggcatggtgcggggcgacgagaaatcactgttccgcgac
tgcatctatgaactgccgctgcgttacatgatcaagcatcagttcctggtgccgccggag
cggctggatatgccggtggtacagtatgacttcagccgcctgacggcgcagtcgaacggc
ctgttcagcgaagccgatctgaatcgcgaactgaaacagcagcagcgcgtgacgccccat
atcatccgtcagattgtggagttcgctgaggatcggctgggggtgatgattttcgcttcc
accgtggatcatgcgcgtgaaatcctgcagctgctgcccgaaaacagcgcgctggtctcc
gccgaaacgcccgcccgcgagcgtgatgccctgatcctggcgtttaaagcgcagcagctg
aaattcctggtgaacgtagcggtactgactaccggctttgatgcgccgcacgtagacctg
attgcgatactgcgcccgaccgagtcggtcagcctctatcagcaaatcgtcggccgcggc
ctgcggctctcgcccggtaagcgcgactgcctgatcctcgattatgccggtaatccccac
gacctctttacgccggaagtcggcgcgccgaaaggggccagcgacaatcagccggtgcag
gttttctgccccgcctgcggctttgctaacaccttctggggcaaggcgaccgaagatggc
atggtcatcgaacattttggccggcgctgccagggggtgctggaagatgatgagggagaa
cgcgaacagtgcgactatcgcttccgctttaagagctgtcccgactgcggcgcggaaaat
gatatcgccgcccggcgctgtcaccagtgcgataaagtgctggtcgatcccgacgatatg
ctcaaagcggcactgaaactcaaggatgcactggtgctgcgctgtggcggcatgacgctg
gaacagggatcggatgccaaaggtgagtggctcaaagcgacctaccatgacgaggatggc
accagcgtcagcgagcgtttccggctgcagacgcccgcgcagcggaaagcgtttgagcaa
ctctttatgcgtccgcatcagcgcgcacccggtgtaccgcttggctggcagaccgccgcc
gacgtgctggcgctgcagccgctgttgcgccatcccgattttgtggtggccagggccaaa
ggccagttctggcagatccgtgaaaagatgtttgattatcagggccgctaccgccgcgcg
aatgagctgcgctga
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