Pantoea anthophila: OJ965_10560
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Entry
OJ965_10560 CDS
T08866
Symbol
rsmF
Name
(GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
pano
Pantoea anthophila
Brite
KEGG Orthology (KO) [BR:
pano00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pano03009
]
OJ965_10560 (rsmF)
Enzymes [BR:
pano01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
OJ965_10560 (rsmF)
Ribosome biogenesis [BR:
pano03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
OJ965_10560 (rsmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
Methyltransf_25
TRM
Motif
Other DBs
NCBI-ProteinID:
UZH04521
LinkDB
All DBs
Position
complement(1732092..1733519)
Genome browser
AA seq
475 aa
AA seq
DB search
MSDAASLFPADFLSLMRQSLPDEASFAQFLAISQQPLRRTLRVNTLKISVADFLRLTADY
EWQLTPVPWCEEGFWISREDESLPLGSVAEHLSGLFYIQEASSMLPVTALFDAQTAVSAV
MDMAAAPGSKTTQIAARMGNQGIILANEFSSSRVKVLHANITRCGVTNSALTHFDARVFG
PALPEQFDAILLDAPCSGEGVMRKDPDALRNWSLASTEEIAATQRDLLDSAFHALKPGGT
LVYSTCTLNQIENQQVIAWLLQRYPDAVEILPLNELFAGAEQAATPEGYLHVFPQMFDSE
GFFVARLRKTASVDPLPAPGYKVGKLPFSHVSRKLESDIIQAAAAVSLRWDDSLVLWQRD
KEIWLFPEAVTPLLGRVRFSRIGLKLAETFAKGYRWQHEAVIALAQPDAKHAFELTAAEA
EEWYRGRDIYPESEPAGNEMIVTYQQQPLGLAKKVGSRIKNSYPRELVRDGRLFR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagatgctgcttcgcttttccccgccgattttctctctttaatgcgtcagagcctg
cccgatgaggccagcttcgcgcagttcctcgccatcagtcagcagccgctgcgccgcacg
ctgcgggtgaataccctgaagatcagcgtggctgacttcctgcgtctcaccgcagactat
gagtggcagcttacgccggtgccgtggtgcgaagagggattctggatcagccgggaagat
gagagcctgccgctgggcagcgtcgcggaacacctcagcggcctgttctatattcaggaa
gccagctccatgctgccggtcactgccctgtttgacgcgcagaccgcggtcagcgccgtg
atggatatggcggcggcaccgggttcaaaaaccacccagattgcggccaggatgggcaat
cagggtatcattctggccaatgagttctcctccagccgggtgaaagtcctgcacgccaat
attacccgctgcggcgtcaccaacagtgcgctgacacatttcgacgcccgggttttcggt
cctgcgctgccggaacagtttgacgccatcctgcttgacgccccctgctcaggcgaaggg
gtgatgcggaaagatcccgatgccctgagaaactggtcgctggccagtacagaagagatt
gccgccacccagcgcgacctgctcgacagcgccttccatgcccttaaaccgggcggcacg
ctggtctactcgacctgcaccctgaatcagattgagaatcagcaggtcatcgcctggctg
ctgcagcgttaccccgacgccgtggagatcctgccgctcaacgaactgtttgcgggggcg
gagcaggccgccacgccagagggttatctgcacgttttcccgcagatgttcgacagcgaa
ggcttttttgtggcccggttgcgcaaaaccgcgtcggtcgatccgctgcctgcaccgggc
tataaagtcggcaagctgcccttctcgcacgtcagccgcaagctggagagcgacatcatt
caggccgccgccgccgtctcactacgctgggacgattcgctggtgctgtggcagcgtgat
aaagagatctggctgttcccggaggccgtcaccccgctgctgggcagagtgcgtttctca
agaattggcctcaagctggctgaaaccttcgcgaaaggctatcgctggcagcatgaggcg
gtcatcgcgctggcgcaaccggatgcgaagcacgccttcgaactgacggcagccgaggca
gaagagtggtatcgcgggcgggatatctatccggaaagcgaacccgccggtaatgagatg
attgtcacttatcagcagcagccgctggggctggcaaagaaagtcggcagccgtatcaag
aacagctacccccgcgagctggtgcgggacgggcgtctgttccgctga
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