Pantoea anthophila: OJ965_12985
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Entry
OJ965_12985 CDS
T08866
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K00361
nitrite reductase [NAD(P)H] [EC:
1.7.1.4
]
Organism
pano
Pantoea anthophila
Pathway
pano00910
Nitrogen metabolism
pano01100
Metabolic pathways
pano01120
Microbial metabolism in diverse environments
pano01310
Nitrogen cycle
Module
pano_M00531
Assimilatory nitrate reduction, nitrate => ammonia
pano_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
pano00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
OJ965_12985 (nirB)
Enzymes [BR:
pano01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
OJ965_12985 (nirB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox
Rieske_2
Rubredoxin_C
NIR_SIR
Fer2_BFD
Pyr_redox_3
NIR_SIR_ferr
DAO
NAD_binding_9
NAD_binding_8
GIDA
FAD_oxidored
AlaDh_PNT_C
FAD_binding_2
Rieske_4
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
UZH01634
LinkDB
All DBs
Position
complement(2243981..2248045)
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AA seq
1354 aa
AA seq
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MRQRLLVIGNGMAGMQMVERLVQRAPQRFAITVIGREPHGNYNRVLLSPVLAGEMVFDET
LIHDPDWYQRHGVTLLSGETVLQIDLAARTLQTCQRQLGWDRLVFATGSRPRWPAIPGIE
GDNVVTFRSIADVRQLLAGEGPIVVLGGGYLGIEAAAALRARGRAVTLVHHKPWLLDRQL
DAQAGGQLQAALEQRGIRCLLNSGIAAIGKADVTLTDGQRCAAHQVVIAIGVEPEVTLAR
AAGLPCQRGILVDGQLRSSVSGVYAVGECCEHQGETPGLVAPCLAQAEILAAQLAGSPQP
DFVSQPLATRLKVSGISLFSAGDISEGESLHSFDPLSGDYRRLFLRQGRLRGVLLSGDTR
QGPALLARLQRGEAVTLNALFDPDQPEPQPQAAESPEMSKPVLAVVGHGMVSHYFLEQLV
ARQLHQHYHIVVYGEELQPAYDRVHLSDYFSGKAADVLSLVSADFFALQGIELRSGCQVV
AIDRAQRSLRDSAGNELAWDRLVLATGSRAFVPPVPGHDGDRCFVYRTLDDLDAIAACAR
HSQRGVVIGGGLLGLEAANALKQLGLETHVVEFAPRLMAVQLDEGGALMLRQKIDALGVT
VHTSKQTDIIEPQPDGSVVLRFADGSALPTDLVLFSAGIRPRDELAREAGLTLGPRGGIE
INDCCQTSDAAIFAIGECALWNGQIFGLVAPGYQMARVLAGHLAGEPAAFSGADMSTKLK
LLGVEVASFGDAHGRTPGSQHYYWSDGPKGIYKKIVVSADNTRLLGGVLVGDSSEYTTLL
QMMLNAMPLPATPESLILPALAGAPKAPGVAALPDSAQVCSCHNVSKGDICAAVQAGCGE
MSSIKSCTRAATGCGGCAALVKQVMEYELENLGVEVKKDVCDHFSYSRQELYHLVRAGEF
RTFEALLASHGKGQGCEVCKPLVASLLASCWNDYLLRPAHLPLQDTNDRYFANIQKDGTY
SVVPRVPGGEITPQGLIAIGEVAARYDLYTKITGGQRIDLFGARLDQLPDIWQTLLDAGF
ETGHAYGKSLRTVKSCVGSTWCRYGVQDSTAFAIALENRYKGLRAPHKIKMAVSGCTREC
AEAQSKDIGVIATDKGWNLYVCGNGGMKPRHADLFASDLDDATLLRYVDRLLMFYIRTAD
RLQRTSVWMDNLEGGLDYLRQVIIEDSLGLGATLEAEMQQVVDAYQCEWQTTLADPSRLA
LFTPTLNSAQPDETLHYSRVRGQRQPEAVAARPLLQLPAEPWSAICTLEAIPPQAGIGAR
LGSERVALFRFGETLYALEDREPGSDASVLSRGILGDVGGEPVVISPLYKQRVRLRDGQS
LDNPQHQLRCWPVKLEAGQIWLANRPLNPLAQAS
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaacggttgctggtgataggcaatggcatggcggggatgcagatggtggagcgg
ctggtgcagcgtgcgccgcagcgctttgctatcacggtcattggccgcgagccgcacggc
aactacaaccgcgtgctgctctcgccggtgctggccggggaaatggtattcgatgaaacc
ctgatccatgaccctgactggtatcagcggcacggcgtcacgctgctgagcggtgaaacc
gtgctgcagatcgacctggcggcccgcacgctgcagacctgtcagcgccagcttggctgg
gatcggctggtgtttgccaccggatcacggccgcgctggcctgcgatccccggcattgag
ggcgataacgtcgtgacgtttcgcagcattgcagatgtccggcagctgctggcgggtgag
gggccaatcgtggtgctgggtggcggctatctcgggattgaagccgcggcggcgctgcgc
gcccggggacgggcggtgacgctggttcatcacaagccctggctgctggatcgtcagctg
gatgctcaggcgggcgggcagctacaggcggctctggagcagcgcggtatccgctgtctg
ctgaacagcggcattgcggccatcggcaaagcagatgtgacgctgacggatggccagcgc
tgcgccgcccatcaggtggtgatcgccatcggcgttgagccggaggtgacgctggccagg
gcggcggggctgccctgtcagcgcggcattctggtggatggccagctgcgcagctcggtc
agcggggtgtatgccgtgggcgagtgttgtgaacaccagggtgaaaccccggggctggtg
gccccctgcctggcgcaggctgagattctggctgcgcagctggcgggatcgccgcagccc
gatttcgtcagtcagccgctggcgacccggctcaaagtcagcggcatttcgctgttcagc
gccggggatatcagtgagggggaatccctccacagtttcgatccgctttccggcgactat
cgccgtctgtttcttcgccagggccgcctgcgcggggtgctgctctctggcgacacccgg
cagggcccggcactgctggcgcgtctgcagcggggcgaggcggtcacgcttaacgccctg
ttcgaccccgatcaacctgaaccgcagccgcaggctgcagagagtcctgagatgagtaaa
cccgtattagccgtggtcggtcacggtatggtcagtcactactttcttgagcaactcgtt
gcccgccagctgcatcagcattaccacatcgtggtgtacggcgaggagttgcagccagcc
tacgatcgggttcatctctccgactacttcagcggcaaagcggcggatgtgctgtcactg
gtcagcgcagacttttttgccctgcaggggattgaactgcgcagcggctgtcaggtggtg
gcaatcgatcgggcgcagcgcagcctgcgcgacagcgcgggcaatgagctggcgtgggac
aggctggtgctggcaaccggttcacgcgcgtttgtgccgccggtgccgggccacgatggc
gaccgctgctttgtctaccgcaccctggacgatctggatgcgatcgcagcctgcgcccgc
cacagtcagcgcggtgtggtgatcggcggcggcctgctcggtctggaggcagcgaacgcc
ctgaagcagctcgggctggaaacccacgtagtggagtttgcgccgcgactgatggcggtg
cagctggatgagggcggggcgctgatgctgcgccagaagattgatgcgctgggcgtcacg
gttcacacctcgaagcagaccgacattattgagccgcagccggacggcagcgtggtgctg
cggtttgccgacggcagcgcgctgcccaccgatctggtgctcttctccgccggtatccgg
ccgcgggatgagctggcgcgggaggcgggcctgacgctcggcccccgcggcggcattgaa
attaacgactgctgccagaccagcgatgcggcgatctttgccattggcgaatgcgccttg
tggaacgggcagattttcgggctggtcgcccccggttaccagatggcacgggtgcttgcc
ggacatctggctggagagcctgcggccttcagcggtgccgacatgagcacaaaactgaaa
ctgctgggagtggaggtggcgtcgttcggcgacgcgcacgggcgcacgccgggcagccag
cactattactggagtgatggccctaaaggcatctacaaaaagatcgtggtctccgcggat
aacacccggctgctggggggcgtgctggtgggcgacagcagtgagtacaccacgctgctg
cagatgatgctcaatgcaatgccgctgcccgcaaccccggaaagcctgatcctgcctgcg
ctggccggtgcgccgaaagcgcccggcgtcgcggcgctgcccgacagtgcgcaggtctgc
tcctgccacaacgtcagcaagggcgacatctgtgcggcggttcaggccggatgcggggag
atgagcagtatcaaaagctgcacccgagccgccaccggctgcggcggctgcgcggcgctg
gtgaagcaggtcatggagtatgaactggaaaacctcggcgtcgaggtgaagaaggatgtc
tgcgaccatttcagctattcgcgtcaggagctgtatcacctggtgcgggcgggggagttc
agaaccttcgaggcgctgctggcgtctcacggcaaaggccagggctgcgaagtgtgcaaa
ccgctggtggcgtcgctgctcgcttcctgctggaacgactacctgctcagaccggcgcat
ctgccgttgcaggacaccaacgatcgctacttcgccaacatccagaaagatggcacctac
tccgtcgtgccgcgcgtgccggggggcgaaatcacgccgcaggggctgattgccattggt
gaggtggcggcgcgctacgatctctacaccaaaatcaccggcggccagcgtatcgacctg
tttggcgcgcggctcgaccagctgcccgacatctggcagacgctgctcgacgccgggttt
gaaaccggtcacgcctatggcaagtcgctgcgcaccgtgaagtcctgcgtcggatcgacc
tggtgccgctatggcgtgcaggactcgaccgccttcgctatcgccctggagaaccgctac
aagggactgcgcgcgccgcacaagatcaagatggcggtctccggctgcacccgcgaatgc
gccgaggcgcagagcaaggatatcggggtgatcgccaccgacaagggctggaacctctac
gtctgcggcaatggcggcatgaagccgcgtcacgccgacctcttcgccagcgatctcgat
gatgccacgctgctgcgctatgtggatcgcctgctgatgttctacatccgcaccgccgat
cgtctgcagcgtaccagcgtctggatggacaatctggagggcggtctggactatctgcgg
caggtgatcatcgaggatagcctcgggctgggcgcgacgctggaggcggagatgcagcag
gtggtcgacgcttaccagtgcgagtggcagaccacgctggcggacccgtcgcgcctggcg
ctgttcaccccaaccctcaacagcgcgcagccggatgagacactgcactacagccgggtg
cgcggtcagcgtcagcctgaagcggtggccgcgcggccactgttacagctgcccgccgag
ccgtggagtgccatctgtacgctggaggcgattccgcctcaggcggggatcggtgcgcgc
ctcggcagcgaacgggtggccctgttccgctttggcgagacgctctatgcgctggaggac
cgcgagcccggcagcgatgccagcgtgctgtcgcgcgggattctgggcgatgtgggcggc
gaaccggtggtgatctccccgctctataaacagcgggtgcggctgcgtgacggacagagc
ctggataacccgcagcatcagctgcgctgctggccggtgaagctggaagcggggcagatc
tggctggcaaaccgtccgctcaacccgctggcgcaggcatcatga
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