Pantoea anthophila: OJ965_14665
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Entry
OJ965_14665 CDS
T08866
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pano
Pantoea anthophila
Pathway
pano02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pano00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OJ965_14665 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pano02000
]
OJ965_14665 (msbA)
Enzymes [BR:
pano01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
OJ965_14665 (msbA)
Transporters [BR:
pano02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
OJ965_14665 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
AAA_16
AAA_22
AAA_25
RsgA_GTPase
AAA_30
nSTAND3
ABC_membrane_2
AAA_29
APS_kinase
AAA_18
Ploopntkinase3
AAA_24
MMR_HSR1
DUF87
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
UZH01942
LinkDB
All DBs
Position
complement(2607761..2609509)
Genome browser
AA seq
582 aa
AA seq
DB search
MHQDKDLSTWQTFRRLWPMIAPNKAGLIVASVALIINAAGDALMLSLLKPLLDDGFGKAD
RSVMLWMPLVVIGLMLVRGVTSYISSYCISWVSGNVVMNIRRRLFSHMMGMPVSFFDQQS
TGTLLSRITYDSEQVASSSSGALVTVVREGASIIGLFIMMFYYSWQLSLILIVLAPIVSF
AIRTVSKRFRSISKSMQNTMGQVTTSAEQMLKGHKEVLIFGGQEIESERFNRVSNRMRQQ
GMKLVSASSISDPVIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFSILDSEQEVDNGTREITRAKGDIEFRDVTFTYPGREVPALR
NINLSLPAGKTVALVGRSGSGKSTMASLLTRFYDIQQGEILLDGFDLREYTLRSLRNQVA
LVSQNVHLFNDTIANNIAYARSEQYSREEIERAATMAHAMDFINKMDKGLDTVIGENGVL
LSGGQRQRIAIARALLRDCPILILDEATSALDTESERAIQSALDELQKNRTSLVIAHRLS
TIEKADEIVVIEDGQIVERGTHQVLLAERGAYAQLHKMQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaagataaagatctctctacgtggcagacgttccgccgactctggccgatgatc
gcgccaaataaagcgggattaattgtggcctctgtcgccctgattattaatgctgcgggc
gacgccttaatgctctccctgttgaaaccgttactggatgatggttttggtaaagccgac
cggtcagtaatgctttggatgccgttggtggtgatcggcctgatgctggtacgtggcgta
accagctatatctccagctactgcatctcctgggtctccggcaatgtcgtgatgaatatt
cgccgtcgcctgttcagccatatgatgggcatgccggtttcgttttttgaccagcagtcg
accggcaccctgctgtcgcgtatcacttatgactctgaacaggtcgcctcctcctcttcc
ggtgcgctggtcaccgtggtgcgtgaaggggcgtcgattattggcctgtttatcatgatg
ttctactacagctggcagctgtcgttaatcctgatcgtgctggcacctatcgtctccttt
gccatccgcacagtttctaagcgcttccgttcaatcagcaaaagtatgcagaacaccatg
gggcaggtgaccaccagcgccgagcagatgctgaaaggacataaagaggtactgattttt
ggcggtcaggaaattgagtcagagcgctttaaccgcgtcagtaaccgtatgcgtcagcag
ggaatgaagctggtctcagcctcctctatttccgatccggtgattcaactgatcgcctct
ctggccctggcttttgtcctttacgccgccagtttcccgagcgtcatggataccctgacc
gctggcaccatcaccgtggtcttctcttcgatgattgctctgatgcgcccgcttaagtct
ctgaccaacgtcaatgcccagttccagcgcggcatggcagcctgtcagaccctgttctcc
attctggacagtgaacaggaagtggacaatggcacccgcgaaattacccgcgccaaaggc
gatattgagttccgcgacgtgacctttacctatccgggccgtgaagtcccggcactgcgc
aatatcaatctgtcgctgcccgccggaaaaacggtcgcgctggtgggccgttccggctcc
ggtaagtccacgatggcgagcctgctgacccgcttttatgacatccagcagggtgaaatt
ctgctggacggttttgacctgcgtgagtacaccctgcgttcgctgcgtaatcaggtggcg
ctggtgtcgcagaatgtgcatcttttcaacgacacgattgccaataacatcgcctatgcg
cgcagtgagcaatacagccgtgaggagatcgaacgggcagcgaccatggcgcacgccatg
gactttatcaataaaatggataaaggcctggatacggtcattggtgagaatggcgtgctg
ctgtctggcggccagcgtcagcgtattgccatcgcccgtgccctgctgcgcgattgtccg
attctgatccttgatgaagcgacctcagctctggataccgagtccgaacgtgcgattcag
tcagccctggatgagttgcagaagaaccgcacctcgctggtgattgcgcatcgactctcc
acgattgagaaagcggatgagattgtggtgattgaagatggtcagatcgttgaacgtgga
acgcatcaggtgctgctggctgaacgcggtgcctatgcccagctgcacaagatgcaattc
ggccaatga
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