Pantoea anthophila: OJ965_15680
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Entry
OJ965_15680 CDS
T08866
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pano
Pantoea anthophila
Brite
KEGG Orthology (KO) [BR:
pano00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pano03400
]
OJ965_15680 (phrB)
Enzymes [BR:
pano01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
OJ965_15680 (phrB)
DNA repair and recombination proteins [BR:
pano03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
OJ965_15680 (phrB)
Prokaryotic type
OJ965_15680 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DPRP
Motif
Other DBs
NCBI-ProteinID:
UZH02136
LinkDB
All DBs
Position
complement(2824732..2826156)
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AA seq
474 aa
AA seq
DB search
MTTHLVWLRNDLRINDNLALHAACRDSKANVIALFLATPEQWQQHEMSPKQAAFIHASLL
EVQDALAERGIRLHYQACNAFSDSIDALAAFCEKQKVDQLFYNYQYEVNERQRDAEAEKR
LDKAGVICQGFDDSLLLAPGSVQSGDRSMYKVFTPFSKAFVRRLQQGLPECVPAPKAREG
APLKTQAIPAFDYPKGEFDRDLFPPGETAALKRLRHFAKQPVLDYPDKRDLPALDATSRL
SVYLATGVLSPRQCLHRVLHEHPDALDNSRAFTWLNELIWREFYRHLLVAYPSLCRHKPF
VDWTHRVEWQRNEAHFDAWKAGKTGFPIVDAAMRQMKEMGWMHNRLRMITASFLVKDLLI
DWREGERYFMQQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPQGDFIRH
YLPELADVPDSDIHQPHRWAEKHHKKLDYPAPIVDHKAARKKTLDAFERAKSAA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatctggtctggctgcgtaacgatttacgcatcaacgataatctggcgctg
cacgccgcctgtcgcgacagcaaggcgaacgtcattgcgctcttcctggcgacgccggaa
cagtggcaacagcatgagatgtcacctaaacaggctgcctttatccacgccagcctgctg
gaagtgcaggatgcgctggcagagcggggcatcagactgcactatcaggcgtgtaacgcc
ttcagcgacagcattgatgctctggcagcgttttgtgaaaagcagaaggtcgaccagctt
ttctataactatcagtatgaggtcaatgagcgtcagcgtgatgcagaagctgaaaagcgt
ctcgacaaagcgggggttatctgtcagggatttgatgacagcctgctgctggcacccggt
agcgtacagagcggcgaccgctccatgtataaggtgttcacgcccttcagcaaagccttt
gtccgacgtcttcagcaggggttgccggagtgcgtccctgcgccaaaagcgcgtgaaggc
gcaccgctgaagacccaggcgattcctgcatttgactaccccaaaggcgagtttgaccgg
gatctttttccgccaggcgaaaccgcggcgctgaagcgtctgcgccacttcgctaaacag
ccggtgctggactatcccgataaacgcgatctgcctgcgctggatgcgaccagccgtctg
tcggtttatctggcaacaggcgtgctgtcgccccgccagtgtctgcatcgtgtcctgcat
gaacatcccgatgcgctggacaacagccgcgcatttacctggctgaatgaactcatctgg
cgtgaattttaccggcatctgctggtcgcctatccctccctgtgccgccataagcccttt
gttgactggacgcaccgggtggaatggcagcgcaatgaggcccatttcgacgcctggaaa
gcgggaaaaacgggctttccgatcgttgacgctgcgatgcggcagatgaaggagatgggc
tggatgcataaccggttacgcatgatcaccgccagctttctggtgaaagatctgctgatc
gactggcgcgaaggggagcgctattttatgcagcagttgattgatggcgatctggcggcg
aacaatggcggctggcagtgggccgcgtcaaccgggacggacgccgcaccctatttccgc
atctttaacccgacgacccagggcgagcgcttcgatccgcagggcgattttatccgccac
tatctgccggaactggccgatgtccccgacagcgatattcaccagccgcaccgctgggcg
gagaagcatcataagaaactcgattatccggcgccaatcgtggatcataaggccgcacgt
aaaaagacattagacgcctttgagcgcgccaaaagcgccgcctga
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