Pantoea anthophila: OJ965_17250
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Entry
OJ965_17250 CDS
T08866
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pano
Pantoea anthophila
Pathway
pano03030
DNA replication
pano03430
Mismatch repair
pano03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pano00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OJ965_17250 (dnaE)
03430 Mismatch repair
OJ965_17250 (dnaE)
03440 Homologous recombination
OJ965_17250 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pano03032
]
OJ965_17250 (dnaE)
03400 DNA repair and recombination proteins [BR:
pano03400
]
OJ965_17250 (dnaE)
Enzymes [BR:
pano01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OJ965_17250 (dnaE)
DNA replication proteins [BR:
pano03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OJ965_17250 (dnaE)
DNA repair and recombination proteins [BR:
pano03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OJ965_17250 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UZH02419
LinkDB
All DBs
Position
complement(3132808..3136290)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMVDGLAKTGPLIKKAAALGMPAIAITDFTNLCGLVKFYGGAHGA
GIKPVIGADFKVASELMGDELTQLTVLAANNTGYQNLTLLISRAYQRGYGVDGPIIDRDW
LMELQEGLILLSGGRRGDVGRSLLRGNSALVSQCLSFYQQHFPDRYYLELIRTGRPDEES
YLHAAVELAIAEGIPVVATNEVCFINEEDFDAHEIRVATHDGYTLDDPKRPRNYSPQQYM
RSEAEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVAKSREGL
EERLVFLFPDEAERLQKRPEYDERLEVELNVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDIDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFIAEPQ
LPAMYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEHGQFPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRREKQGLEPIDIASIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFRDGAESMGIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYPFHVNDAGEIVYGIGAIKG
VGEGPIEAIIDARNEGGYFRELFDLCARTDTKKINRRVMEKLIMSGAFDRLGPHRAALMS
ALGDALKAADQHAKAEAIGQADMFGVLADEPEQVEKSYASVTRWPEQVQLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTDRGKITVAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARAKLRFGAAWRISPSD
RLLNDLRSLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccccgttttatacatctgcgcgtccacagtgactattcgatggttgatggc
ctggcgaaaaccgggccgctgatcaaaaaggcggctgcgctcggcatgcccgcgattgcg
atcaccgacttcactaacctgtgtggcctggtgaaattctacggcggggcgcacggcgca
gggataaaaccggttattggtgccgattttaaggttgccagcgagctgatgggggatgaa
ctcacgcagctgaccgtgctggcggcgaacaataccggctatcagaacctgacgctgctg
atctcccgcgcctatcagcgtggctatggcgtggacgggccgattatcgatcgcgactgg
ctgatggaattgcaggaagggttaatcctgctgtcaggcggacgccgcggagatgtcggc
cgcagcctgctgcgcggaaacagcgcgctggtttcacagtgcctctctttttatcagcag
catttccctgacagatactatctggaactgatccgcaccggccggccggatgaagagagc
tacctgcacgcggctgtggagctggcgattgccgaaggcattccggtggtcgcgaccaac
gaagtctgctttatcaatgaagaggatttcgacgcgcatgaaatccgcgtggccacccat
gacggctatacgctggatgaccccaagcgtccgcgcaactacagtcctcagcaatatatg
cgcagcgaagcggagatgtgcgagctcttctcggacatcccggaagcgctggaaaacagc
gtagagattgctaagcgttgtaacgtcacggtccggctgggcgaatacttcctgccgcag
ttcccgaccggtgatatgaccacggaagattatctggtcgcgaaatcccgcgaggggctg
gaagagcgtctggtgttcctgttcccggacgaagctgagcggctgcagaaacgcccggaa
tatgatgagcgtctggaggttgaactcaacgtgatcaaccagatgggcttcccgggctac
ttcctgatcgtgatggagttcatccagtggtccaaggataatggcgtgccggtcgggccg
ggtcgtggttccggtgccggctcgctggtggcctatgcgctgaaaattaccgatatcgat
ccgctggagtttgacctcctgttcgaacgtttcctgaacccggaacgtgtctcaatgccc
gactttgacgtcgatttctgcatggagaagcgtgaccaggtgattgaacacgtcgcggac
atgtacgggcgcgaagcggtttcacagatcatcactttcggcaccatggcggcgaaagcg
gttattcgtgacgttggccgcgtgctgggtcatccctacggtttcgtggaccgcatttcc
aaactgatcccgcccgatcccggcatgacgctggaaaaagcctttattgctgaaccgcag
ctgccggccatgtatgaggcggatgaagaggtcaaagcgctgatcgacatggcgcgtaag
ctggaaggggtcacgcgtaacgccggtaaacatgccggtggcgtggtcatcgcgccaacg
aagatcaccgattttgcgccgctctactgcgatgagcacggccagttcccggtgacccag
ttcgataaaaatgatgtggaatatgccggcctggtgaagttcgacttcctggggctgaga
acgctgaccatcatcgactgggcgctgaagatgattaacccgcgccgggaaaagcagggg
ctggagccgatcgacatcgcctctatcccgctggatgacaagaaaagcttcgatatgctg
cagcgctcggaaaccaccgcggtattccagcttgaatcgcgcggcatgaaggatctgatc
aagcgtctgaagcccgactgctttgaagatatgatcgcactggtggcgctgttccgtccg
gggccgcttcagtccggcatggtggataacttcatcgaccgtaagcatggtcgtgaagcg
atctcctatcccgatatccagtggcagcacgagagtctgaaaccggtgctggagccgaca
tacggcatcattctttatcaggaacaggtgatgcagatcgcccaggttctctccggttac
accctgggtggcgcagatatgctgcgtcgcgccatggggaaaaagaaaccggaagagatg
gccaagcagcgttccgttttccgtgacggtgctgaaagcatgggcatcgacggcgaactg
tcgatgaagatcttcgatctggtagaaaaatttgcaggctatggctttaacaagtcacac
tctgcggcttacgcactggtctcttaccagacgctatggctgaaagcgcactatccggca
gagtttatggccgcggtaatgaccgccgatatggataacaccgagaaggtggtaggcctg
gtcgatgagtgctggcggatgggactgaaggtgctgccgcccgatatcaactccggcctc
tatcccttccatgtgaatgacgcaggtgaaattgtttacggtatcggtgcgataaaaggg
gtcggtgaaggcccgatcgaagcgatcattgacgcccgaaacgaaggcggttacttccgc
gagctgtttgatctctgcgcccgaaccgacaccaaaaagatcaaccgtcgggtgatggaa
aaactgatcatgtccggggccttcgatcgcctggggccgcatcgcgccgcgctgatgagt
gcgctcggtgacgcgttaaaagcggccgatcagcacgcgaaggcggaggcgattggccag
gcagatatgtttggcgtgctggcggacgagccggagcaggtggagaaatcgtacgccagc
gtcacgcgatggccggagcaggtgcagctggatggcgaacgggaaaccctggggctctac
ctgaccgggcacccgattaatcagtatctgaaagaaattgagcgttacgttggcggggtg
cggctgaaagatatgcatccaaccgaccgggggaaaattaccgtggcggccggtctggtg
atcgctgcacgggtaatggtcaccaaacgcggcaaccgaattggtatctgtactctggac
gatcgttctggtcgtcttgaggtgatgttatttaccgatgcgttagataaataccagcag
ctgctggagaaagaccgaatcctgatcgtcagtggacaggtcagctttgatgacttcagt
ggtggccttaaaatgaccgctcgtgaagttatggacatcgacgaagctcgcgaaaaatac
gcgcgcggacttgctatctcgctgacggacaggcaaattgatgaccagctattaaaccga
ctccgtcagtccctggaacctcatcgatcagggacgattccggtgcatctctactatcag
agagccgacgcgcgagcgaagctgcgctttggggcagcgtggcgaatttcgcccagcgat
cgtttacttaacgatctgcgctcgttgattggatcggagcaggtggaactggagtttgac
tag
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integrated database retrieval system
