Pantoea anthophila: OJ965_18725
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Entry
OJ965_18725 CDS
T08866
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pano
Pantoea anthophila
Pathway
pano03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pano00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OJ965_18725 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pano03019
]
OJ965_18725 (pnp)
03016 Transfer RNA biogenesis [BR:
pano03016
]
OJ965_18725 (pnp)
Enzymes [BR:
pano01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OJ965_18725 (pnp)
Messenger RNA biogenesis [BR:
pano03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OJ965_18725 (pnp)
Transfer RNA biogenesis [BR:
pano03016
]
Prokaryotic type
tRNA degradation factors
OJ965_18725 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
OB_RRP5_4th
aRib
KH-I_KHDC4-BBP
S1_RRP5
KH_SLS1_2
Spt6_S1
UPF0181
Motif
Other DBs
NCBI-ProteinID:
UZH02684
LinkDB
All DBs
Position
complement(3474967..3477102)
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKTKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSV
NPQVHPDIVAMIGASAALSLSGLPFNGPIGSARVGYINDQYVLNPTADELKQSRLDLVVA
GTQNAVLMVESEAEILSEEQMLGAVVFGHDQQQVVIENINALVAEAGKPRWDWQPEAANT
PLISRVAALAEARISDAYRITDKQERYTQVGVIKDETIAALLAEDETLDSAEISDIVHSL
EKNVVRTRILNGEPRIDGREKDMIRGLDVRTGVLPRTHGSSLFTRGETQALVTATLGTTR
DAQNLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKAED
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDEKFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQEALNQAKGARLHILGVMEQA
ISTPRTEISEFAPRIYTIKISSDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGLKAKEAIRRIEEITAEIEVGRIYSGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVMEVDRQGRVRLSIKEATESKPQAEEAAAVTTPAAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgtacgcaaattccaatatggtcaacataccgtcacgctggaaacc
ggcatgatggcgcgccaggcgactgctgctgttatggtgagcatggacgataccgcggtg
ttcgtcactgtcgtcggccagaaaaaaactaaacccggtcaggacttcttcccactgacc
gtgaactatcaggagcgtacctacgctgctggtcgtatcccaggcagcttcttccgtcgt
gaaggccgcccaagcgaaggcgaaacgctgattgcgcgtctgattgaccgcccgattcgt
ccgctgttcccggaaggtttcgttaacgaagttcaggtcattgcgaccgtggtttctgta
aacccacaggttcatcctgacatcgttgctatgatcggtgcttctgccgcgctgtcactc
tcgggtctgccgttcaatggcccaatcggttctgcgcgtgttggttacatcaacgatcaa
tacgttctgaacccgacagcagatgagctgaaacagtctcgtctggacctggtggttgcc
ggtacgcagaatgccgttctgatggtggaatctgaagctgagatcctgtcagaagagcag
atgctgggcgccgtggtctttggccacgatcagcagcaggtggtaattgaaaacatcaat
gcgctggttgctgaagcgggcaaaccacgctgggactggcagccagaagccgccaacacc
ccactgatttcacgcgttgctgcactggcagaagcgcgcatcagcgatgcttaccgcatc
accgacaagcaggagcgttacacgcaggttggcgtcatcaaagacgaaaccattgcagcg
ctgctggctgaagatgagacgctggatagcgctgaaatcagcgacatcgtccatagcctg
gaaaagaacgttgttcgtacccgtatcctgaacggcgagccgcgtatcgatggccgcgaa
aaggatatgatccgtggtctggacgtgcgtactggcgtgctgccacgtactcacggttca
tccctgttcacccgtggtgagacgcaggcgctggtaacagcaacgctgggtaccacccgc
gatgcgcagaacctggatgagctgatgggcgagcgcactgacagcttcctattccactac
aacttccctccgtactctgtcggtgaaaccggcatggtcggttcgccgaagcgtcgtgaa
attggtcacggtcgtctggcgaaacgcggtgtgttagcggttatgccaaaggcggaagat
ttcccttacaccgtgcgtgtggtgtctgaaatcaccgaatctaacggctcctcttcaatg
gcctctgtctgcggtgcctcactggcgctgatggacgcgggtgtgccaatcaaagccgct
gttgcaggtattgcaatgggtctggtgaaagaagatgagaagtttgtggttctgtctgac
atcctgggcgacgaagatcacctgggcgacatggacttcaaagtagccggtagccgtgaa
ggtatcaccgcgctgcagatggacatcaaaatcgaaggcatcacgcgtgaaatcatgcag
gaagcgctgaaccaggctaagggtgcgcgtctgcacatcctgggcgttatggaacaggct
atcagcacgccacgtactgagatttctgaattcgcaccgcgcatttacaccatcaagatc
agctctgacaagatcaaagatgtgattggtaaaggcggctcagtgatccgtgcactgacc
gaagagaccggcacaacgatcgaaatcgaagatgacggcactgtgaaaatcgctgcgacc
gatggtctgaaagcgaaagaagcgatccgtcgtatcgaagagattaccgcagagatcgaa
gtgggccgcatttacagtggtaaagtgacccgtatcgttgacttcggtgccttcgtcgcc
atcggcggtggtaaagaaggtctggttcacatttcgcaaatcgccgataagcgcgttgag
aaagtgactgactatctgcagatgggtcaggaagtgccggtgaaggtgatggaagtcgat
cgccagggccgcgtacgtctgagcatcaaagaagcgacagaatctaagccgcaggctgaa
gaagctgcagcggtgaccacacctgccgctgaataa
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