Pantoea anthophila: OJ965_19085
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Entry
OJ965_19085 CDS
T08866
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pano
Pantoea anthophila
Pathway
pano03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pano00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OJ965_19085 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pano03019
]
OJ965_19085 (groL)
03110 Chaperones and folding catalysts [BR:
pano03110
]
OJ965_19085 (groL)
03029 Mitochondrial biogenesis [BR:
pano03029
]
OJ965_19085 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pano04147
]
OJ965_19085 (groL)
Enzymes [BR:
pano01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
OJ965_19085 (groL)
Messenger RNA biogenesis [BR:
pano03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OJ965_19085 (groL)
Chaperones and folding catalysts [BR:
pano03110
]
Heat shock proteins
HSP60 / Chaperonin
OJ965_19085 (groL)
Mitochondrial biogenesis [BR:
pano03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
OJ965_19085 (groL)
Exosome [BR:
pano04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OJ965_19085 (groL)
Exosomal proteins of other body fluids (saliva and urine)
OJ965_19085 (groL)
Exosomal proteins of breast cancer cells
OJ965_19085 (groL)
Exosomal proteins of colorectal cancer cells
OJ965_19085 (groL)
Exosomal proteins of bladder cancer cells
OJ965_19085 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
UZH02753
LinkDB
All DBs
Position
complement(3550298..3551947)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DQAVVSAVEKLKALSVPCSDSKAIAQVGTISANSDETVGQLIAQAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGMELEKAALEDLGQAKRVVINKDTTTIIDGVGEETTIQGRVTQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVAAQLSELRGQNEDQNVGIKVALRAMEAPLRQIVSNAGEEPSVVANNVKAGDGNYGYNA
QTEEYGNMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAGAGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaatgacgctcgcgtaaaaatgctgcgtggcgtg
aacgtactggcagatgcagtaaaagttaccctgggcccgaaaggccgtaacgtggttctg
gataaatcttttggtgcaccgaccatcactaaagatggcgtgtccgttgcgcgtgaaatc
gaactggaagacaagttcgaaaatatgggcgcgcagatggtgaaagaagtggcctctaaa
gcgaacgacgctgcaggcgacggcaccaccaccgcgaccgtactggcgcaggctatcatc
accgaaggtctgaaagccgttgccgcgggtatgaacccgatggacctgaagcgcggtatc
gaccaggccgttgtgtctgccgttgagaaactgaaagcgctgtctgtaccttgctcagac
tctaaagcgattgcgcaggtaggtactatctctgctaactccgatgaaaccgtgggccag
ctgattgctcaggcgatggagaaagtgggtaaagaaggcgtgatcaccgttgaagaaggc
accggcctgcaggacgagctggatgtggttgaaggtatgcagtttgatcgcggctacctg
tcaccgtacttcatcaacaagccagaaaccggtgcggttgaactggaatcgccgttcatc
ctgctggctgacaagaaaatctctaacatccgtgaaatgctgcccgtgctggaagccgtt
gcgaaagccggtaaacctctgctgatcatcgcggaagatgttgaaggcgaagccctggca
acgctggtggtcaacaccatgcgcggcatcgttaaagtggctgcggttaaagcaccaggc
ttcggtgaccgtcgtaaagccatgctgcaggatatcgctatcctgaccggcggtaccgtc
atctctgaagagatcggtatggagctggaaaaagctgcgctggaagatctgggtcaggca
aaacgtgttgtgatcaacaaagacaccaccaccatcatcgacggtgtgggtgaagagacc
accattcagggccgtgttacccagattcgtcagcagatcgaagaagcgacctctgactac
gacaaagaaaaactgcaggagcgcgtcgcgaaactggcaggcggcgtagccgttctgaaa
gtgggcgcagccactgaagttgaaatgaaagagaagaaagcgcgcgttgaagatgcactg
cacgcaacccgtgctgctgtcgaagaaggcgtggttgcaggtggtggtgtggcgctggtt
cgcgttgcagcacagctgtcagagctgcgtggtcagaacgaagaccagaacgtcggtatc
aaagttgcgctgcgcgcgatggaagcaccactgcgtcagatcgtctctaacgccggtgaa
gagccttctgttgtggcgaacaacgtgaaagcgggcgacggtaactacggttacaacgcg
cagactgaagagtacggcaacatgatcgacttcggtatcctggacccaactaaagtgacc
cgttctgcgctgcagtacgcggcctctgttgcgggtctgatgatcactaccgagtgcatg
gttactgacctgccaaaaggcgacgcacctgatttaggcgctggcgctggcggtatgggt
ggcatgggcggtatgggcggcatgatgtaa
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